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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180020085
FTCV01001616
464602
Alphaproteobacteria
TTC
Glu
>WENV180020139
FTCV01002366
654960
Alphaproteobacteria
CTC
Glu
>WENV180020136
FTCV01002314
45981
Alphaproteobacteria
TGA
Ser
>WENV180020129
FTCV01002231
287573
Alphaproteobacteria
TGG
Pro
>WENV180020028
FTCV01000772
656305
Alphaproteobacteria
CAC
Val
>WENV180020024
FTCV01000732
455369
Alphaproteobacteria
CGC
Ala
>WENV180020045
FTCV01000939
451742
Alphaproteobacteria
GGC
Ala
>WENV180020117
FTCV01002066
273518
Alphaproteobacteria
CCT
Arg
>WENV180020014
FTCV01000541
655401
Alphaproteobacteria
GAC
Val
>WENV180020154
FTCV01002552
658305
Alphaproteobacteria
GAC
Val
>WENV180020163
FTCV01002738
653931
Alphaproteobacteria
GTT
Asn
>WENV180020041
FTCV01000897
654962
Alphaproteobacteria
TTG
Gln
>WENV180020036
FTCV01000863
180868
Alphaproteobacteria
GTA
Tyr
>WENV180020128
FTCV01002231
454504
Alphaproteobacteria
CAT
Met
>WENV180020026
FTCV01000764
273519
Alphaproteobacteria
CAT
Met
>WENV180020152
FTCV01002508
802153
Alphaproteobacteria
CTG
Gln
>WENV180020031
FTCV01000835
273160
Alphaproteobacteria
ACG
Arg
>WENV180020032
FTCV01000835
273160
Alphaproteobacteria
ACG
Arg
>WENV180020137
FTCV01002328
780039
Alphaproteobacteria
GCA
Cys
>WENV180020005
FTCV01000290
180561
Alphaproteobacteria
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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