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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180033138
FTKF01000011
271014
Actinomycetota
GGG
Pro
>WENV180033152
FTKF01002120
271014
Actinomycetota
GGG
Pro
>WENV180033230
FTKF01096604
86917
Actinomycetota
GGA
Ser
>WENV180033277
FTKF01238039
86917
Actinomycetota
GGA
Ser
>WENV180033161
FTKF01003088
282709
Actinomycetota
GTC
Asp
>WENV180033145
FTKF01000921
273817
Actinomycetota
GAA
Phe
>WENV180033261
FTKF01184505
273817
Actinomycetota
GAA
Phe
>WENV180033223
FTKF01083323
456156
Actinomycetota
CTC
Glu
>WENV180033224
FTKF01083323
456156
Actinomycetota
CTC
Glu
>WENV180033269
FTKF01202451
452168
Actinomycetota
GCC
Gly
>WENV180033270
FTKF01202451
452168
Actinomycetota
GCC
Gly
>WENV180033290
FTKF01344080
779541
Actinomycetota
GCA
Cys
>WENV180033226
FTKF01089884
454760
Actinomycetota
TTC
Glu
>WENV180033250
FTKF01138712
452049
Actinomycetota
GTG
His
>WENV180033227
FTKF01092161
457182
Actinomycetota
GTT
Asn
>WENV180033245
FTKF01127457
457182
Actinomycetota
GTT
Asn
>WENV180033159
FTKF01002882
112333
Actinomycetota
CAG
Leu
>WENV180033211
FTKF01050734
457174
Actinomycetota
GGT
Thr
>WENV180033259
FTKF01174398
457174
Actinomycetota
GGT
Thr
>WENV180033284
FTKF01282592
457174
Actinomycetota
GGT
Thr
>WENV180033178
FTKF01013737
275937
Actinomycetota
GAT
Ile
>WENV180033282
FTKF01264899
275937
Actinomycetota
GAT
Ile
>WENV180033151
FTKF01002096
86918
Actinomycetota
GAG
Leu
>WENV180033155
FTKF01002502
86918
Actinomycetota
GAG
Leu
>WENV180033272
FTKF01223581
275936
Actinomycetota
CGC
Ala
>WENV180033218
FTKF01061474
653688
Actinomycetota
CAC
Val
>WENV180033219
FTKF01061474
653688
Actinomycetota
CAC
Val
>WENV180033244
FTKF01119570
653688
Actinomycetota
CAC
Val
>WENV180033286
FTKF01295034
653668
Actinomycetota
GAC
Val
>WENV180033291
FTKF01344080
653668
Actinomycetota
GAC
Val
>WENV180033148
FTKF01001418
271039
Actinomycetota
CTT
Lys
>WENV180033164
FTKF01003463
271039
Actinomycetota
CTT
Lys
>WENV180033213
FTKF01057052
271039
Actinomycetota
CTT
Lys
>WENV180033222
FTKF01077919
271039
Actinomycetota
CTT
Lys
>WENV180033256
FTKF01165726
271039
Actinomycetota
CTT
Lys
>WENV180033248
FTKF01131746
463136
Actinomycetota
ACG
Arg
>WENV180033201
FTKF01035523
271036
Actinomycetota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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