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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170635491
JDSF01033656
876102
Alphaproteobacteria
CCC
Gly
>WENV170635328
JDSF01003144
307882
Alphaproteobacteria
GTC
Asp
>WENV170635325
JDSF01002401
314164
Alphaproteobacteria
CCG
Arg
>WENV170635471
JDSF01030283
314164
Alphaproteobacteria
CCG
Arg
>WENV170635384
JDSF01008966
733049
Alphaproteobacteria
CAC
Val
>WENV170635470
JDSF01030064
309662
Alphaproteobacteria
GTG
His
>WENV170635349
JDSF01004550
307879
Alphaproteobacteria
CAT
Met
>WENV170635451
JDSF01025249
132453
Alphaproteobacteria
CAG
Leu
>WENV170635311
JDSF01001537
509470
Alphaproteobacteria
GGC
Ala
>WENV170635381
JDSF01008042
215831
Alphaproteobacteria
TAG
Leu
>WENV170635378
JDSF01007628
311213
Alphaproteobacteria
ACG
Arg
>WENV170635428
JDSF01016812
524731
Alphaproteobacteria
CGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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