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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170635168
JDSF01000159
567431
Bacillota
CCA
Trp
>WENV170635495
JDSF01034167
312864
Bacillota
GAT
Ile
>WENV170635129
JDSF01000084
760959
Bacillota
GCC
Gly
>WENV170635150
JDSF01000115
760959
Bacillota
GCC
Gly
>WENV170635095
JDSF01000013
734528
Bacillota
GCC
Gly
>WENV170635155
JDSF01000140
734528
Bacillota
GCC
Gly
>WENV170635255
JDSF01000441
734528
Bacillota
GCC
Gly
>WENV170635414
JDSF01015015
734528
Bacillota
GCC
Gly
>WENV170635134
JDSF01000085
538404
Bacillota
TAC
Val
>WENV170635137
JDSF01000086
538404
Bacillota
TAC
Val
>WENV170635169
JDSF01000159
538404
Bacillota
TAC
Val
>WENV170635200
JDSF01000250
538404
Bacillota
TAC
Val
>WENV170635506
JDSF01036932
508474
Bacillota
TGC
Ala
>WENV170635184
JDSF01000199
508992
Bacillota
TGT
Thr
>WENV170635196
JDSF01000250
508992
Bacillota
TGT
Thr
>WENV170635465
JDSF01029499
734526
Bacillota
TTC
Glu
>WENV170635477
JDSF01031079
734526
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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