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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170639797
JFJP01008127
271725
Gammaproteobacteria
CAT
Met
>WENV170641939
JFJP01038268
467367
Gammaproteobacteria
GGT
Thr
>WENV170642955
JFJP01047339
467367
Gammaproteobacteria
GGT
Thr
>WENV170640965
JFJP01031708
464662
Gammaproteobacteria
TAC
Val
>WENV170640982
JFJP01031884
454388
Gammaproteobacteria
TAC
Val
>WENV170640967
JFJP01031717
30481
Gammaproteobacteria
GCT
Ser
>WENV170639674
JFJP01005809
780592
Gammaproteobacteria
CCC
Gly
>WENV170640959
JFJP01031547
275934
Gammaproteobacteria
GGG
Pro
>WENV170641030
JFJP01032814
451643
Gammaproteobacteria
GAA
Phe
>WENV170641042
JFJP01032912
451643
Gammaproteobacteria
GAA
Phe
>WENV170641938
JFJP01038268
780093
Gammaproteobacteria
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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