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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
97 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170679980
LFCJ01002132
154106
Euryarchaeota
GCT
Ser
>WENV170680191
LFCJ01005572
154106
Euryarchaeota
GCT
Ser
>WENV170680206
LFCJ01005908
154106
Euryarchaeota
GCT
Ser
>WENV170679598
LFCJ01000064
455315
Euryarchaeota
GTC
Asp
>WENV170680050
LFCJ01003058
455315
Euryarchaeota
GTC
Asp
>WENV170680051
LFCJ01003058
455315
Euryarchaeota
GTC
Asp
>WENV170679759
LFCJ01000290
655456
Euryarchaeota
GTG
His
>WENV170679873
LFCJ01001160
655456
Euryarchaeota
GTG
His
>WENV170679879
LFCJ01001217
655456
Euryarchaeota
GTG
His
>WENV170680049
LFCJ01003026
655456
Euryarchaeota
GTG
His
>WENV170679572
LFCJ01000032
186294
Euryarchaeota
GGA
Ser
>WENV170680073
LFCJ01003624
186294
Euryarchaeota
GGA
Ser
>WENV170680473
LFCJ01012307
186294
Euryarchaeota
GGA
Ser
>WENV170680285
LFCJ01007106
655455
Euryarchaeota
GGC
Ala
>WENV170679710
LFCJ01000179
274446
Euryarchaeota
TTT
Lys
>WENV170680178
LFCJ01005234
671927
Euryarchaeota
CGC
Ala
>WENV170680340
LFCJ01008992
671927
Euryarchaeota
CGC
Ala
>WENV170680354
LFCJ01009601
671927
Euryarchaeota
CGC
Ala
>WENV170679987
LFCJ01002213
87293
Euryarchaeota
CGA
Ser
>WENV170679667
LFCJ01000111
241130
Euryarchaeota
CAC
Val
>WENV170679789
LFCJ01000479
241130
Euryarchaeota
CAC
Val
>WENV170679816
LFCJ01000635
241130
Euryarchaeota
CAC
Val
>WENV170679869
LFCJ01001107
241130
Euryarchaeota
CAC
Val
>WENV170679876
LFCJ01001198
241130
Euryarchaeota
CAC
Val
>WENV170680066
LFCJ01003414
241130
Euryarchaeota
CAC
Val
>WENV170680209
LFCJ01005926
241130
Euryarchaeota
CAC
Val
>WENV170680252
LFCJ01006783
241130
Euryarchaeota
CAC
Val
>WENV170680389
LFCJ01010239
241130
Euryarchaeota
CAC
Val
>WENV170680466
LFCJ01011891
241130
Euryarchaeota
CAC
Val
>WENV170680100
LFCJ01004073
241117
Euryarchaeota
CAT
Met
>WENV170680074
LFCJ01003637
455594
Euryarchaeota
TGG
Pro
>WENV170679700
LFCJ01000161
87115
Euryarchaeota
GAG
Leu
>WENV170680140
LFCJ01004800
87115
Euryarchaeota
GAG
Leu
>WENV170680284
LFCJ01007075
87115
Euryarchaeota
GAG
Leu
>WENV170679902
LFCJ01001324
87279
Euryarchaeota
GAG
Leu
>WENV170679981
LFCJ01002136
274421
Euryarchaeota
GTA
Tyr
>WENV170679594
LFCJ01000061
241064
Euryarchaeota
>WENV170679735
LFCJ01000227
241064
Euryarchaeota
>WENV170679881
LFCJ01001218
241064
Euryarchaeota
>WENV170679907
LFCJ01001364
241064
Euryarchaeota
>WENV170679917
LFCJ01001538
241064
Euryarchaeota
>WENV170679945
LFCJ01001832
241064
Euryarchaeota
>WENV170680291
LFCJ01007239
241064
Euryarchaeota
>WENV170679725
LFCJ01000200
274425
Euryarchaeota
GAA
Phe
>WENV170679866
LFCJ01001078
274425
Euryarchaeota
GAA
Phe
>WENV170679972
LFCJ01001986
274425
Euryarchaeota
GAA
Phe
>WENV170680312
LFCJ01007946
274425
Euryarchaeota
GAA
Phe
>WENV170680343
LFCJ01009125
274425
Euryarchaeota
GAA
Phe
>WENV170680499
LFCJ01012887
274425
Euryarchaeota
GAA
Phe
>WENV170680114
LFCJ01004263
455561
Euryarchaeota
TGG
Pro
>WENV170679643
LFCJ01000079
453957
Euryarchaeota
>WENV170679912
LFCJ01001411
453957
Euryarchaeota
>WENV170679954
LFCJ01001920
453957
Euryarchaeota
>WENV170680327
LFCJ01008503
453957
Euryarchaeota
>WENV170679539
LFCJ01000016
780383
Euryarchaeota
>WENV170679880
LFCJ01001218
780383
Euryarchaeota
>WENV170679999
LFCJ01002456
780383
Euryarchaeota
>WENV170679911
LFCJ01001411
455559
Euryarchaeota
GTT
Asn
>WENV170680555
LFCJ01014708
455558
Euryarchaeota
>WENV170679792
LFCJ01000508
455564
Euryarchaeota
>WENV170680120
LFCJ01004491
455564
Euryarchaeota
>WENV170680122
LFCJ01004519
455564
Euryarchaeota
>WENV170680197
LFCJ01005754
455575
Euryarchaeota
>WENV170679678
LFCJ01000125
274438
Euryarchaeota
GTA
Tyr
>WENV170680391
LFCJ01010311
274438
Euryarchaeota
GTA
Tyr
>WENV170680117
LFCJ01004343
455560
Euryarchaeota
GTC
Asp
>WENV170680181
LFCJ01005367
455560
Euryarchaeota
GTC
Asp
>WENV170680182
LFCJ01005367
455560
Euryarchaeota
GTC
Asp
>WENV170679726
LFCJ01000206
241116
Euryarchaeota
GAC
Val
>WENV170679727
LFCJ01000211
241116
Euryarchaeota
GAC
Val
>WENV170679765
LFCJ01000332
241116
Euryarchaeota
GAC
Val
>WENV170679777
LFCJ01000431
241116
Euryarchaeota
GAC
Val
>WENV170679788
LFCJ01000479
241116
Euryarchaeota
GAC
Val
>WENV170680022
LFCJ01002809
241116
Euryarchaeota
GAC
Val
>WENV170680097
LFCJ01004047
241116
Euryarchaeota
GAC
Val
>WENV170680281
LFCJ01006985
482509
Euryarchaeota
TGG
Pro
>WENV170679839
LFCJ01000785
655371
Euryarchaeota
GGC
Ala
>WENV170679846
LFCJ01000870
655371
Euryarchaeota
GGC
Ala
>WENV170679943
LFCJ01001801
655371
Euryarchaeota
GGC
Ala
>WENV170680065
LFCJ01003396
655371
Euryarchaeota
GGC
Ala
>WENV170680067
LFCJ01003423
655371
Euryarchaeota
GGC
Ala
>WENV170680069
LFCJ01003459
655371
Euryarchaeota
GGC
Ala
>WENV170680142
LFCJ01004822
655371
Euryarchaeota
GGC
Ala
>WENV170680384
LFCJ01009994
655371
Euryarchaeota
GGC
Ala
>WENV170680290
LFCJ01007222
780384
Euryarchaeota
TCC
Gly
>WENV170680057
LFCJ01003248
274445
Euryarchaeota
CGT
Thr
>WENV170680311
LFCJ01007924
274445
Euryarchaeota
CGT
Thr
>WENV170680081
LFCJ01003843
780394
Euryarchaeota
CCC
Gly
>WENV170680518
LFCJ01013253
218148
Euryarchaeota
GGA
Ser
>WENV170679967
LFCJ01001956
241108
Euryarchaeota
TTC
Glu
>WENV170680115
LFCJ01004275
241108
Euryarchaeota
TTC
Glu
>WENV170679807
LFCJ01000578
87296
Euryarchaeota
GAG
Leu
>WENV170679872
LFCJ01001139
87296
Euryarchaeota
GAG
Leu
>WENV170680157
LFCJ01004872
87296
Euryarchaeota
GAG
Leu
>WENV170680515
LFCJ01013188
87296
Euryarchaeota
GAG
Leu
>WENV170680535
LFCJ01013865
655370
Euryarchaeota
CGC
Ala
>WENV170680139
LFCJ01004773
274423
Euryarchaeota
CTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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