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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
53 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170680584
LFEF01000152
273543
Alphaproteobacteria
ACG
Arg
>WENV170680749
LFEF01017797
654745
Alphaproteobacteria
CAC
Val
>WENV170680708
LFEF01012764
454566
Alphaproteobacteria
GAA
Phe
>WENV170680777
LFEF01021149
30494
Alphaproteobacteria
GCT
Ser
>WENV170680887
LFEF01030099
45989
Alphaproteobacteria
GGA
Ser
>WENV170680885
LFEF01029879
786788
Alphaproteobacteria
CTG
Gln
>WENV170680599
LFEF01002442
456497
Alphaproteobacteria
TGT
Thr
>WENV170680775
LFEF01020937
45999
Alphaproteobacteria
TGA
Ser
>WENV170680761
LFEF01019472
270887
Alphaproteobacteria
TGG
Pro
>WENV170680630
LFEF01005648
270892
Alphaproteobacteria
CGG
Pro
>WENV170680889
LFEF01030368
180423
Alphaproteobacteria
CAA
Leu
>WENV170680890
LFEF01030955
463568
Alphaproteobacteria
CCA
Trp
>WENV170680800
LFEF01023356
780884
Alphaproteobacteria
CTG
Gln
>WENV170680635
LFEF01005971
451867
Alphaproteobacteria
CTT
Lys
>WENV170680832
LFEF01025726
465568
Alphaproteobacteria
GGC
Ala
>WENV170680778
LFEF01021149
465412
Alphaproteobacteria
GAA
Phe
>WENV170681030
LFEF01044822
454054
Alphaproteobacteria
TGC
Ala
>WENV170680689
LFEF01010618
782892
Alphaproteobacteria
TTG
Gln
>WENV170680956
LFEF01038491
653532
Alphaproteobacteria
GTT
Asn
>WENV170680963
LFEF01039109
654987
Alphaproteobacteria
GAC
Val
>WENV170680743
LFEF01016369
114771
Alphaproteobacteria
CAG
Leu
>WENV170680819
LFEF01024589
458093
Alphaproteobacteria
CTT
Lys
>WENV170680726
LFEF01014812
780630
Alphaproteobacteria
CCC
Gly
>WENV170680923
LFEF01034723
276079
Alphaproteobacteria
CAT
Met
>WENV170680702
LFEF01012360
455506
Alphaproteobacteria
CAT
Met
>WENV170680829
LFEF01025447
19958
Alphaproteobacteria
GCT
Ser
>WENV170680958
LFEF01038893
454059
Alphaproteobacteria
TTT
Lys
>WENV170680769
LFEF01019935
180421
Alphaproteobacteria
GTA
Tyr
>WENV170680999
LFEF01041166
455821
Alphaproteobacteria
CTT
Lys
>WENV170680955
LFEF01038172
273540
Alphaproteobacteria
CCG
Arg
>WENV170680754
LFEF01018267
270896
Alphaproteobacteria
CCG
Arg
>WENV170680622
LFEF01004026
655625
Alphaproteobacteria
TTC
Glu
>WENV170681008
LFEF01042667
653518
Alphaproteobacteria
GAC
Val
>WENV170680952
LFEF01037958
779492
Alphaproteobacteria
GCA
Cys
>WENV170680764
LFEF01019484
454056
Alphaproteobacteria
CGT
Thr
>WENV170680720
LFEF01014285
655014
Alphaproteobacteria
GTT
Asn
>WENV170680694
LFEF01011152
654998
Alphaproteobacteria
GCC
Gly
>WENV170680906
LFEF01033077
270897
Alphaproteobacteria
CCT
Arg
>WENV170680911
LFEF01033682
180975
Alphaproteobacteria
GAG
Leu
>WENV170680705
LFEF01012471
780159
Alphaproteobacteria
CTG
Gln
>WENV170681026
LFEF01044631
240992
Alphaproteobacteria
GGG
Pro
>WENV170680600
LFEF01002442
179994
Alphaproteobacteria
GTA
Tyr
>WENV170680763
LFEF01019472
653586
Alphaproteobacteria
TTC
Glu
>WENV170680828
LFEF01025247
454625
Alphaproteobacteria
CAT
Met
>WENV170680772
LFEF01020125
276396
Alphaproteobacteria
CCT
Arg
>WENV170680626
LFEF01004837
273065
Alphaproteobacteria
ACG
Arg
>WENV170680714
LFEF01013432
273536
Alphaproteobacteria
GTG
His
>WENV170681029
LFEF01044793
180702
Alphaproteobacteria
CAG
Leu
>WENV170680913
LFEF01033712
655013
Alphaproteobacteria
TGT
Thr
>WENV170681023
LFEF01044350
454699
Alphaproteobacteria
TTT
Lys
>WENV170681007
LFEF01042533
654915
Alphaproteobacteria
GCC
Gly
>WENV170680680
LFEF01009719
184579
Alphaproteobacteria
CAG
Leu
>WENV170680912
LFEF01033705
653539
Alphaproteobacteria
GAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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