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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170683407
LFIK01011106
273854
Gammaproteobacteria
CAT
Met
>WENV170683492
LFIK01013288
273854
Gammaproteobacteria
CAT
Met
>WENV170683021
LFIK01003542
271464
Gammaproteobacteria
TGG
Pro
>WENV170682761
LFIK01001098
457172
Gammaproteobacteria
GAA
Phe
>WENV170682833
LFIK01001554
273856
Gammaproteobacteria
GAC
Val
>WENV170682834
LFIK01001554
273856
Gammaproteobacteria
GAC
Val
>WENV170682912
LFIK01002579
273856
Gammaproteobacteria
GAC
Val
>WENV170683151
LFIK01005494
270982
Gammaproteobacteria
GAT
Ile
>WENV170683646
LFIK01017735
270982
Gammaproteobacteria
GAT
Ile
>WENV170683435
LFIK01011702
114537
Gammaproteobacteria
TAA
Leu
>WENV170682470
LFIK01000159
780766
Gammaproteobacteria
CTG
Gln
>WENV170682966
LFIK01003024
780766
Gammaproteobacteria
CTG
Gln
>WENV170683622
LFIK01017062
780766
Gammaproteobacteria
CTG
Gln
>WENV170683544
LFIK01015243
273853
Gammaproteobacteria
CAT
Met
>WENV170683334
LFIK01009248
273323
Gammaproteobacteria
GAC
Val
>WENV170683336
LFIK01009388
274209
Gammaproteobacteria
ACG
Arg
>WENV170683337
LFIK01009388
274209
Gammaproteobacteria
ACG
Arg
>WENV170682643
LFIK01000695
780765
Gammaproteobacteria
CCC
Gly
>WENV170682780
LFIK01001239
780765
Gammaproteobacteria
CCC
Gly
>WENV170683635
LFIK01017227
673628
Gammaproteobacteria
GTG
His
>WENV170683493
LFIK01013390
459731
Gammaproteobacteria
GGT
Thr
>WENV170682417
LFIK01000099
780241
Gammaproteobacteria
GCA
Cys
>WENV170683308
LFIK01008751
780241
Gammaproteobacteria
GCA
Cys
>WENV170683434
LFIK01011702
780241
Gammaproteobacteria
GCA
Cys
>WENV170683040
LFIK01003706
454425
Gammaproteobacteria
TGT
Thr
>WENV170683413
LFIK01011106
655385
Gammaproteobacteria
GCC
Gly
>WENV170683433
LFIK01011702
655385
Gammaproteobacteria
GCC
Gly
>WENV170683539
LFIK01015124
780764
Gammaproteobacteria
TCC
Gly
>WENV170683410
LFIK01011106
454422
Gammaproteobacteria
TTC
Glu
>WENV170683412
LFIK01011106
454422
Gammaproteobacteria
TTC
Glu
>WENV170683528
LFIK01014815
454422
Gammaproteobacteria
TTC
Glu
>WENV170683157
LFIK01005596
655194
Gammaproteobacteria
GGT
Thr
>WENV170683259
LFIK01007789
274204
Gammaproteobacteria
GGG
Pro
>WENV170683632
LFIK01017198
274204
Gammaproteobacteria
GGG
Pro
>WENV170682339
LFIK01000004
455293
Gammaproteobacteria
TTT
Lys
>WENV170682340
LFIK01000004
455293
Gammaproteobacteria
TTT
Lys
>WENV170682994
LFIK01003230
455293
Gammaproteobacteria
TTT
Lys
>WENV170682995
LFIK01003230
455293
Gammaproteobacteria
TTT
Lys
>WENV170683037
LFIK01003681
271253
Gammaproteobacteria
CAT
Met
>WENV170683165
LFIK01005882
271253
Gammaproteobacteria
CAT
Met
>WENV170683463
LFIK01012321
271253
Gammaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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