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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170696187
LGVF01001435
285054
Bacteroidota
GAT
Ile
>WENV170697903
LGVF01218178
285054
Bacteroidota
GAT
Ile
>WENV170698145
LGVF01271653
278884
Bacteroidota
GGC
Ala
>WENV170696902
LGVF01059848
456730
Bacteroidota
TTT
Lys
>WENV170696903
LGVF01059848
456730
Bacteroidota
TTT
Lys
>WENV170696905
LGVF01059848
456730
Bacteroidota
TTT
Lys
>WENV170696906
LGVF01059848
456730
Bacteroidota
TTT
Lys
>WENV170697991
LGVF01234996
347728
Bacteroidota
TGC
Ala
>WENV170697347
LGVF01119003
273835
Bacteroidota
GTT
Asn
>WENV170697336
LGVF01117386
286517
Bacteroidota
TGC
Ala
>WENV170697366
LGVF01122434
653934
Bacteroidota
TTC
Glu
>WENV170696912
LGVF01061115
653934
Bacteroidota
TTC
Glu
>WENV170696913
LGVF01061115
653934
Bacteroidota
TTC
Glu
>WENV170699372
LGVF01537985
32554
Bacteroidota
GGA
Ser
>WENV170697990
LGVF01234996
294510
Bacteroidota
GAT
Ile
>WENV170696839
LGVF01053966
285374
Bacteroidota
GTC
Asp
>WENV170698984
LGVF01453638
241493
Bacteroidota
TAC
Val
>WENV170699044
LGVF01466479
241493
Bacteroidota
TAC
Val
>WENV170699535
LGVF01577558
241493
Bacteroidota
TAC
Val
>WENV170697346
LGVF01119003
241493
Bacteroidota
TAC
Val
>WENV170698983
LGVF01453638
241493
Bacteroidota
TAC
Val
>WENV170696330
LGVF01011857
280682
Bacteroidota
TGT
Thr
>WENV170698631
LGVF01378804
280682
Bacteroidota
TGT
Thr
>WENV170699215
LGVF01506578
280682
Bacteroidota
TGT
Thr
>WENV170698740
LGVF01404964
272122
Bacteroidota
GTC
Asp
>WENV170698741
LGVF01404964
272122
Bacteroidota
GTC
Asp
>WENV170697427
LGVF01132303
241407
Bacteroidota
TGG
Pro
>WENV170698080
LGVF01254100
241407
Bacteroidota
TGG
Pro
>WENV170697110
LGVF01082322
466831
Bacteroidota
GCC
Gly
>WENV170698600
LGVF01371501
466831
Bacteroidota
GCC
Gly
>WENV170699030
LGVF01463197
241634
Bacteroidota
TGG
Pro
>WENV170699448
LGVF01555670
655582
Bacteroidota
GCC
Gly
>WENV170698081
LGVF01254100
286380
Bacteroidota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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