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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170696187
LGVF01001435
317585
Bacteroidota
GAT
Ile
>WENV170696333
LGVF01011857
735236
Bacteroidota
GGT
Thr
>WENV170696839
LGVF01053966
306111
Bacteroidota
GTC
Asp
>WENV170696902
LGVF01059848
510201
Bacteroidota
TTT
Lys
>WENV170696903
LGVF01059848
510201
Bacteroidota
TTT
Lys
>WENV170696905
LGVF01059848
510201
Bacteroidota
TTT
Lys
>WENV170696906
LGVF01059848
510201
Bacteroidota
TTT
Lys
>WENV170697110
LGVF01082322
511084
Bacteroidota
GCC
Gly
>WENV170697336
LGVF01117386
322278
Bacteroidota
TGC
Ala
>WENV170697346
LGVF01119003
272422
Bacteroidota
TAC
Val
>WENV170697427
LGVF01132303
272342
Bacteroidota
TGG
Pro
>WENV170697903
LGVF01218178
317585
Bacteroidota
GAT
Ile
>WENV170697981
LGVF01234036
513757
Bacteroidota
TTT
Lys
>WENV170697990
LGVF01234996
308703
Bacteroidota
GAT
Ile
>WENV170697991
LGVF01234996
308704
Bacteroidota
TGC
Ala
>WENV170698081
LGVF01254100
324357
Bacteroidota
TCT
Arg
>WENV170698080
LGVF01254100
272342
Bacteroidota
TGG
Pro
>WENV170698145
LGVF01271653
316148
Bacteroidota
GGC
Ala
>WENV170698600
LGVF01371501
511084
Bacteroidota
GCC
Gly
>WENV170698740
LGVF01404964
308536
Bacteroidota
GTC
Asp
>WENV170698741
LGVF01404964
308536
Bacteroidota
GTC
Asp
>WENV170698983
LGVF01453638
272422
Bacteroidota
TAC
Val
>WENV170698984
LGVF01453638
272422
Bacteroidota
TAC
Val
>WENV170699044
LGVF01466479
272422
Bacteroidota
TAC
Val
>WENV170699218
LGVF01506852
99879
Bacteroidota
TGA
Ser
>WENV170699372
LGVF01537985
35763
Bacteroidota
GGA
Ser
>WENV170699448
LGVF01555670
732746
Bacteroidota
GCC
Gly
>WENV170699535
LGVF01577558
272422
Bacteroidota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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