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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
66 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170727201
LSQX01408421
244112
Euryarchaeota
CCT
Arg
>WENV170722589
LSQX01234693
481455
Euryarchaeota
GTC
Asp
>WENV170721382
LSQX01188196
275042
Euryarchaeota
GAC
Val
>WENV170721384
LSQX01188196
275042
Euryarchaeota
GAC
Val
>WENV170723861
LSQX01283842
275042
Euryarchaeota
GAC
Val
>WENV170718722
LSQX01088206
90180
Euryarchaeota
TGA
Ser
>WENV170722517
LSQX01232629
670433
Euryarchaeota
GCA
Cys
>WENV170719925
LSQX01134003
244111
Euryarchaeota
GGG
Pro
>WENV170719405
LSQX01113396
275041
Euryarchaeota
TAC
Val
>WENV170717474
LSQX01036433
241250
Euryarchaeota
>WENV170727048
LSQX01402792
241250
Euryarchaeota
>WENV170719635
LSQX01121153
456296
Euryarchaeota
GTT
Asn
>WENV170723357
LSQX01265832
456296
Euryarchaeota
GTT
Asn
>WENV170723359
LSQX01265832
456296
Euryarchaeota
GTT
Asn
>WENV170717744
LSQX01047781
298010
Euryarchaeota
TGT
Thr
>WENV170720043
LSQX01138434
298010
Euryarchaeota
TGT
Thr
>WENV170716822
LSQX01012957
655782
Euryarchaeota
GCC
Gly
>WENV170720375
LSQX01151218
655782
Euryarchaeota
GCC
Gly
>WENV170725054
LSQX01328967
655782
Euryarchaeota
GCC
Gly
>WENV170725069
LSQX01329381
655782
Euryarchaeota
GCC
Gly
>WENV170725435
LSQX01342336
655782
Euryarchaeota
GCC
Gly
>WENV170726865
LSQX01396524
655782
Euryarchaeota
GCC
Gly
>WENV170722516
LSQX01232629
670432
Euryarchaeota
GCA
Cys
>WENV170721383
LSQX01188196
655774
Euryarchaeota
GAA
Phe
>WENV170721385
LSQX01188196
655774
Euryarchaeota
GAA
Phe
>WENV170723859
LSQX01283842
655774
Euryarchaeota
GAA
Phe
>WENV170723176
LSQX01257633
90184
Euryarchaeota
TAG
Leu
>WENV170721684
LSQX01200275
670434
Euryarchaeota
CCC
Gly
>WENV170722860
LSQX01246472
90181
Euryarchaeota
GCT
Ser
>WENV170724032
LSQX01290450
90181
Euryarchaeota
GCT
Ser
>WENV170723576
LSQX01273894
298011
Euryarchaeota
TTT
Lys
>WENV170723998
LSQX01288774
298011
Euryarchaeota
TTT
Lys
>WENV170717693
LSQX01046064
655767
Euryarchaeota
GGC
Ala
>WENV170723358
LSQX01265832
241248
Euryarchaeota
CAT
Met
>WENV170719624
LSQX01120940
241252
Euryarchaeota
TCT
Arg
>WENV170723981
LSQX01287837
456300
Euryarchaeota
CTG
Gln
>WENV170720705
LSQX01162923
241249
Euryarchaeota
>WENV170725631
LSQX01349946
241249
Euryarchaeota
>WENV170724217
LSQX01297578
655769
Euryarchaeota
>WENV170725899
LSQX01360154
655769
Euryarchaeota
>WENV170720395
LSQX01151725
456298
Euryarchaeota
TTG
Gln
>WENV170727055
LSQX01403059
241251
Euryarchaeota
TTC
Glu
>WENV170727056
LSQX01403059
241251
Euryarchaeota
TTC
Glu
>WENV170723175
LSQX01257633
241247
Euryarchaeota
CTC
Glu
>WENV170725254
LSQX01336477
241247
Euryarchaeota
CTC
Glu
>WENV170717948
LSQX01055462
87401
Euryarchaeota
GCT
Ser
>WENV170724961
LSQX01325067
229218
Euryarchaeota
CGA
Ser
>WENV170720522
LSQX01156421
242484
Euryarchaeota
TTC
Glu
>WENV170716793
LSQX01011899
456306
Euryarchaeota
GTT
Asn
>WENV170719233
LSQX01106761
456306
Euryarchaeota
GTT
Asn
>WENV170719355
LSQX01111933
456306
Euryarchaeota
GTT
Asn
>WENV170722828
LSQX01245024
456306
Euryarchaeota
GTT
Asn
>WENV170726270
LSQX01373328
456306
Euryarchaeota
GTT
Asn
>WENV170717177
LSQX01027200
298013
Euryarchaeota
CAC
Val
>WENV170722825
LSQX01244681
298013
Euryarchaeota
CAC
Val
>WENV170720399
LSQX01151826
481454
Euryarchaeota
>WENV170726282
LSQX01373848
481454
Euryarchaeota
>WENV170716992
LSQX01019761
154184
Euryarchaeota
CAA
Leu
>WENV170717170
LSQX01026917
157139
Euryarchaeota
GGA
Ser
>WENV170724606
LSQX01312133
456297
Euryarchaeota
TGC
Ala
>WENV170723860
LSQX01283842
655766
Euryarchaeota
GCC
Gly
>WENV170724366
LSQX01302579
670431
Euryarchaeota
>WENV170721386
LSQX01188196
655775
Euryarchaeota
GCC
Gly
>WENV170726344
LSQX01376300
300137
Euryarchaeota
GGC
Ala
>WENV170720143
LSQX01142873
275039
Euryarchaeota
CTT
Lys
>WENV170725601
LSQX01348985
90183
Euryarchaeota
TAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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