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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170736152
LULL01054006
241030
Alphaproteobacteria
TCT
Arg
>WENV170736141
LULL01051053
273805
Alphaproteobacteria
ACG
Arg
>WENV170735563
LULL01004205
655225
Alphaproteobacteria
TTG
Gln
>WENV170735857
LULL01017757
455173
Alphaproteobacteria
GAA
Phe
>WENV170735770
LULL01012048
45799
Alphaproteobacteria
GCT
Ser
>WENV170735856
LULL01017622
180542
Alphaproteobacteria
TAG
Leu
>WENV170736121
LULL01046804
46190
Alphaproteobacteria
GGA
Ser
>WENV170735756
LULL01011474
780260
Alphaproteobacteria
GCA
Cys
>WENV170735579
LULL01004537
655301
Alphaproteobacteria
GGT
Thr
>WENV170735491
LULL01002692
45981
Alphaproteobacteria
TGA
Ser
>WENV170735649
LULL01007024
277664
Alphaproteobacteria
GTC
Asp
>WENV170736140
LULL01050956
275153
Alphaproteobacteria
CGG
Pro
>WENV170736050
LULL01034905
451742
Alphaproteobacteria
GGC
Ala
>WENV170735776
LULL01012325
655363
Alphaproteobacteria
GGT
Thr
>WENV170736061
LULL01036882
459032
Alphaproteobacteria
CCA
Trp
>WENV170735651
LULL01007100
455172
Alphaproteobacteria
GGC
Ala
>WENV170735712
LULL01008840
455172
Alphaproteobacteria
GGC
Ala
>WENV170735506
LULL01002841
274142
Alphaproteobacteria
GAT
Ile
>WENV170735705
LULL01008601
655300
Alphaproteobacteria
GTT
Asn
>WENV170735738
LULL01010486
275155
Alphaproteobacteria
GGG
Pro
>WENV170735885
LULL01019219
275157
Alphaproteobacteria
TGG
Pro
>WENV170736016
LULL01031781
270796
Alphaproteobacteria
GTC
Asp
>WENV170735710
LULL01008743
655361
Alphaproteobacteria
GCC
Gly
>WENV170735900
LULL01020716
274133
Alphaproteobacteria
ACG
Arg
>WENV170735583
LULL01004645
454504
Alphaproteobacteria
CAT
Met
>WENV170736110
LULL01044684
218137
Alphaproteobacteria
TAG
Leu
>WENV170735718
LULL01009148
671670
Alphaproteobacteria
CAC
Val
>WENV170736062
LULL01036949
273907
Alphaproteobacteria
ACG
Arg
>WENV170735810
LULL01013808
281027
Alphaproteobacteria
CCT
Arg
>WENV170735658
LULL01007227
780298
Alphaproteobacteria
CTG
Gln
>WENV170735557
LULL01004006
454914
Alphaproteobacteria
TTT
Lys
>WENV170735664
LULL01007438
112839
Alphaproteobacteria
CAG
Leu
>WENV170735860
LULL01017873
275152
Alphaproteobacteria
TCT
Arg
>WENV170735732
LULL01009999
180543
Alphaproteobacteria
CAA
Leu
>WENV170735964
LULL01026913
780039
Alphaproteobacteria
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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