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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170756511
LUMP01000050
273802
Nitrososphaerota
>WENV170756518
LUMP01000058
313452
Nitrososphaerota
>WENV170756519
LUMP01000058
736956
Nitrososphaerota
GTG
His
>WENV170756520
LUMP01000058
100431
Nitrososphaerota
GAG
Leu
>WENV170756575
LUMP01000151
516203
Nitrososphaerota
TTG
Gln
>WENV170756596
LUMP01000196
272884
Nitrososphaerota
CTC
Glu
>WENV170756597
LUMP01000196
313450
Nitrososphaerota
GCC
Gly
>WENV170756637
LUMP01000331
313457
Nitrososphaerota
TCC
Gly
>WENV170756649
LUMP01000379
313457
Nitrososphaerota
TCC
Gly
>WENV170756712
LUMP01000638
736957
Nitrososphaerota
>WENV170756739
LUMP01000849
129289
Nitrososphaerota
TGA
Ser
>WENV170756750
LUMP01000918
100298
Nitrososphaerota
TAG
Leu
>WENV170756753
LUMP01000945
272886
Nitrososphaerota
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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