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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170820316
MDSY01002338
455176
Cyanobacteriota
GTG
His
>WENV170824138
MDSY01070222
455176
Cyanobacteriota
GTG
His
>WENV170826959
MDSY01120108
460330
Cyanobacteriota
GGC
Ala
>WENV170823237
MDSY01053864
274043
Cyanobacteriota
CCG
Arg
>WENV170821437
MDSY01022251
657271
Cyanobacteriota
GTT
Asn
>WENV170827740
MDSY01135252
274045
Cyanobacteriota
GTC
Asp
>WENV170823547
MDSY01059622
45725
Cyanobacteriota
GGA
Ser
>WENV170826539
MDSY01112457
277538
Cyanobacteriota
GGG
Pro
>WENV170827739
MDSY01135252
455175
Cyanobacteriota
CCA
Trp
>WENV170826476
MDSY01111493
655305
Cyanobacteriota
GAC
Val
>WENV170823014
MDSY01050041
655307
Cyanobacteriota
TGT
Thr
>WENV170824753
MDSY01081619
46524
Cyanobacteriota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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