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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180070607
MPLZ02178436
275828
Alphaproteobacteria
GTC
Asp
>WENV180070512
MPLZ02171855
273797
Alphaproteobacteria
GGG
Pro
>WENV180069155
MPLZ02089662
452917
Alphaproteobacteria
TAC
Val
>WENV180071739
MPLZ02257200
780326
Alphaproteobacteria
CCC
Gly
>WENV180067895
MPLZ02019618
46070
Alphaproteobacteria
CGA
Ser
>WENV180070761
MPLZ02189167
218119
Alphaproteobacteria
>WENV180071016
MPLZ02207086
653538
Alphaproteobacteria
TTC
Glu
>WENV180071221
MPLZ02222153
653538
Alphaproteobacteria
TTC
Glu
>WENV180071721
MPLZ02256419
780661
Alphaproteobacteria
GCA
Cys
>WENV180071981
MPLZ02274902
655359
Alphaproteobacteria
GAC
Val
>WENV180071682
MPLZ02252776
451742
Alphaproteobacteria
GGC
Ala
>WENV180069867
MPLZ02134713
272172
Alphaproteobacteria
GAT
Ile
>WENV180068389
MPLZ02045073
655394
Alphaproteobacteria
GTT
Asn
>WENV180069969
MPLZ02141113
276089
Alphaproteobacteria
CCG
Arg
>WENV180070606
MPLZ02178436
270796
Alphaproteobacteria
GTC
Asp
>WENV180070863
MPLZ02195500
274133
Alphaproteobacteria
ACG
Arg
>WENV180071450
MPLZ02237510
112839
Alphaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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