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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
50 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170992314
MWWB01015429
775142
Bacteroidota
TTC
Glu
>WENV170992199
MWWB01005835
272672
Bacteroidota
TAC
Val
>WENV170992855
MWWB01109804
272672
Bacteroidota
TAC
Val
>WENV170992166
MWWB01004177
274838
Bacteroidota
TAC
Val
>WENV170992432
MWWB01028700
274838
Bacteroidota
TAC
Val
>WENV170992476
MWWB01034081
274838
Bacteroidota
TAC
Val
>WENV170992730
MWWB01074449
274838
Bacteroidota
TAC
Val
>WENV170992813
MWWB01099574
274838
Bacteroidota
TAC
Val
>WENV170993733
MWWB01428420
274838
Bacteroidota
TAC
Val
>WENV170992264
MWWB01010040
272669
Bacteroidota
TGG
Pro
>WENV170992463
MWWB01032073
272669
Bacteroidota
TGG
Pro
>WENV170993568
MWWB01357476
511491
Bacteroidota
TTT
Lys
>WENV170992091
MWWB01001016
732407
Bacteroidota
GGT
Thr
>WENV170992502
MWWB01036367
732407
Bacteroidota
GGT
Thr
>WENV170992826
MWWB01103615
732407
Bacteroidota
GGT
Thr
>WENV170992970
MWWB01143366
732407
Bacteroidota
GGT
Thr
>WENV170992998
MWWB01151202
732407
Bacteroidota
GGT
Thr
>WENV170993242
MWWB01230001
732407
Bacteroidota
GGT
Thr
>WENV170993284
MWWB01248166
732407
Bacteroidota
GGT
Thr
>WENV170992504
MWWB01036453
272539
Bacteroidota
GAT
Ile
>WENV170993126
MWWB01190920
272539
Bacteroidota
GAT
Ile
>WENV170993259
MWWB01238547
272539
Bacteroidota
GAT
Ile
>WENV170993333
MWWB01267813
272539
Bacteroidota
GAT
Ile
>WENV170992092
MWWB01001016
871074
Bacteroidota
CCA
Trp
>WENV170992430
MWWB01028177
871074
Bacteroidota
CCA
Trp
>WENV170992778
MWWB01088935
871074
Bacteroidota
CCA
Trp
>WENV170993264
MWWB01241681
871074
Bacteroidota
CCA
Trp
>WENV170993321
MWWB01262794
871074
Bacteroidota
CCA
Trp
>WENV170993571
MWWB01357698
871074
Bacteroidota
CCA
Trp
>WENV170992212
MWWB01006171
308950
Bacteroidota
GTT
Asn
>WENV170992346
MWWB01018370
308950
Bacteroidota
GTT
Asn
>WENV170993308
MWWB01256711
308950
Bacteroidota
GTT
Asn
>WENV170992105
MWWB01001480
23914
Bacteroidota
GCT
Ser
>WENV170992585
MWWB01051009
23914
Bacteroidota
GCT
Ser
>WENV170992755
MWWB01083177
23914
Bacteroidota
GCT
Ser
>WENV170992531
MWWB01041572
305381
Bacteroidota
GTT
Asn
>WENV170993015
MWWB01156490
305381
Bacteroidota
GTT
Asn
>WENV170993154
MWWB01198763
305381
Bacteroidota
GTT
Asn
>WENV170993165
MWWB01202954
305381
Bacteroidota
GTT
Asn
>WENV170993480
MWWB01320027
305381
Bacteroidota
GTT
Asn
>WENV170992104
MWWB01001451
745054
Bacteroidota
CCT
Arg
>WENV170992612
MWWB01054937
745054
Bacteroidota
CCT
Arg
>WENV170992099
MWWB01001367
514180
Bacteroidota
CCC
Gly
>WENV170992842
MWWB01108306
514180
Bacteroidota
CCC
Gly
>WENV170992946
MWWB01135987
514180
Bacteroidota
CCC
Gly
>WENV170993012
MWWB01155323
514180
Bacteroidota
CCC
Gly
>WENV170992063
MWWB01000423
514840
Bacteroidota
GAA
Phe
>WENV170993072
MWWB01174977
514840
Bacteroidota
GAA
Phe
>WENV170993173
MWWB01205141
514840
Bacteroidota
GAA
Phe
>WENV170993234
MWWB01228616
514840
Bacteroidota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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