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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180109287
OAPJ01064217
319144
Alphaproteobacteria
CAT
Met
>WENV180109193
OAPJ01024102
52980
Alphaproteobacteria
GGA
Ser
>WENV180109092
OAPJ01005671
871758
Alphaproteobacteria
TCC
Gly
>WENV180109181
OAPJ01020764
313362
Alphaproteobacteria
CCG
Arg
>WENV180109339
OAPJ01085528
511322
Alphaproteobacteria
TGC
Ala
>WENV180109176
OAPJ01020198
53140
Alphaproteobacteria
TGA
Ser
>WENV180109114
OAPJ01009394
873550
Alphaproteobacteria
CCC
Gly
>WENV180109142
OAPJ01013979
735376
Alphaproteobacteria
GGT
Thr
>WENV180109113
OAPJ01008714
53149
Alphaproteobacteria
GCT
Ser
>WENV180109203
OAPJ01028035
314443
Alphaproteobacteria
GTG
His
>WENV180109285
OAPJ01061111
735797
Alphaproteobacteria
GAC
Val
>WENV180109204
OAPJ01028288
734347
Alphaproteobacteria
TTG
Gln
>WENV180109026
OAPJ01000285
311213
Alphaproteobacteria
ACG
Arg
>WENV180109129
OAPJ01011381
247450
Alphaproteobacteria
>WENV180109101
OAPJ01006509
310815
Alphaproteobacteria
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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