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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
48 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180130337
OATG01000074
451658
Actinomycetota
CCG
Arg
>WENV180130621
OATG01000469
180100
Actinomycetota
GTA
Tyr
>WENV180131365
OATG01012402
270710
Actinomycetota
CAT
Met
>WENV180130288
OATG01000038
451412
Actinomycetota
GTT
Asn
>WENV180130289
OATG01000038
451412
Actinomycetota
GTT
Asn
>WENV180130291
OATG01000038
451412
Actinomycetota
GTT
Asn
>WENV180130248
OATG01000018
271422
Actinomycetota
GGG
Pro
>WENV180130376
OATG01000118
451381
Actinomycetota
CGT
Thr
>WENV180130309
OATG01000053
451359
Actinomycetota
TTT
Lys
>WENV180131367
OATG01012731
87304
Actinomycetota
TGA
Ser
>WENV180130439
OATG01000188
270486
Actinomycetota
CGG
Pro
>WENV180130290
OATG01000038
451442
Actinomycetota
GGC
Ala
>WENV180131111
OATG01002816
451442
Actinomycetota
GGC
Ala
>WENV180130763
OATG01000895
270467
Actinomycetota
TGG
Pro
>WENV180131470
OATG01039125
451659
Actinomycetota
CCT
Arg
>WENV180131417
OATG01020795
273894
Actinomycetota
TAC
Val
>WENV180130904
OATG01001448
30363
Actinomycetota
GCT
Ser
>WENV180130784
OATG01000955
451655
Actinomycetota
CCA
Trp
>WENV180130622
OATG01000469
271229
Actinomycetota
CAT
Met
>WENV180130360
OATG01000089
284684
Actinomycetota
TCT
Arg
>WENV180131437
OATG01027911
45685
Actinomycetota
GCT
Ser
>WENV180130377
OATG01000118
217997
Actinomycetota
TAG
Leu
>WENV180130375
OATG01000118
653368
Actinomycetota
CTG
Gln
>WENV180130351
OATG01000084
270411
Actinomycetota
ACG
Arg
>WENV180130352
OATG01000084
270411
Actinomycetota
ACG
Arg
>WENV180130355
OATG01000088
451413
Actinomycetota
CCT
Arg
>WENV180130245
OATG01000018
779447
Actinomycetota
GCA
Cys
>WENV180130555
OATG01000347
271299
Actinomycetota
CAT
Met
>WENV180130242
OATG01000018
779382
Actinomycetota
TTG
Gln
>WENV180130472
OATG01000225
228578
Actinomycetota
TAA
Leu
>WENV180130428
OATG01000177
86962
Actinomycetota
TGA
Ser
>WENV180130646
OATG01000525
270403
Actinomycetota
TGT
Thr
>WENV180131454
OATG01032115
451410
Actinomycetota
CGT
Thr
>WENV180130287
OATG01000038
45669
Actinomycetota
GAG
Leu
>WENV180130429
OATG01000177
72674
Actinomycetota
CGA
Ser
>WENV180130436
OATG01000188
653819
Actinomycetota
TTC
Glu
>WENV180130246
OATG01000018
653353
Actinomycetota
GAC
Val
>WENV180130357
OATG01000089
653353
Actinomycetota
GAC
Val
>WENV180130522
OATG01000280
153767
Actinomycetota
CAG
Leu
>WENV180131473
OATG01040482
228603
Actinomycetota
TAA
Leu
>WENV180131462
OATG01035168
780405
Actinomycetota
CCC
Gly
>WENV180130356
OATG01000089
452352
Actinomycetota
GTG
His
>WENV180130521
OATG01000280
779392
Actinomycetota
CCC
Gly
>WENV180131110
OATG01002816
451443
Actinomycetota
TGC
Ala
>WENV180130374
OATG01000118
451402
Actinomycetota
CTC
Glu
>WENV180130354
OATG01000088
274019
Actinomycetota
TAC
Val
>WENV180131399
OATG01017667
270705
Actinomycetota
TCT
Arg
>WENV180130762
OATG01000895
271427
Actinomycetota
CAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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