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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
63 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180136845
OATN01014433
456231
Bacillota
GAA
Phe
>WENV180136846
OATN01014433
218176
Bacillota
GTA
Tyr
>WENV180136434
OATN01000004
464163
Bacillota
CTT
Lys
>WENV180136844
OATN01014433
274500
Bacillota
GTC
Asp
>WENV180136432
OATN01000004
182231
Bacillota
TAG
Leu
>WENV180136469
OATN01000014
31227
Bacillota
GCT
Ser
>WENV180136467
OATN01000013
660193
Bacillota
GCA
Cys
>WENV180136855
OATN01018773
456232
Bacillota
GTG
His
>WENV180136681
OATN01000332
464159
Bacillota
GGT
Thr
>WENV180136787
OATN01003150
456225
Bacillota
CGT
Thr
>WENV180136807
OATN01004652
456228
Bacillota
CGC
Ala
>WENV180136503
OATN01000033
282520
Bacillota
TCT
Arg
>WENV180136856
OATN01018773
655729
Bacillota
TTG
Gln
>WENV180136465
OATN01000013
466746
Bacillota
GAA
Phe
>WENV180136499
OATN01000033
466746
Bacillota
GAA
Phe
>WENV180136768
OATN01001819
780548
Bacillota
CCC
Gly
>WENV180136837
OATN01013342
274966
Bacillota
CGG
Pro
>WENV180136821
OATN01008760
454155
Bacillota
TAC
Val
>WENV180136746
OATN01001127
274968
Bacillota
TCT
Arg
>WENV180136841
OATN01014433
655295
Bacillota
TTC
Glu
>WENV180136749
OATN01001275
87371
Bacillota
CAG
Leu
>WENV180136814
OATN01006292
780437
Bacillota
CTG
Gln
>WENV180136548
OATN01000078
466753
Bacillota
GTT
Asn
>WENV180136822
OATN01008760
456233
Bacillota
TTT
Lys
>WENV180136761
OATN01001572
273884
Bacillota
GAT
Ile
>WENV180136842
OATN01014433
5787
Bacillota
TGA
Ser
>WENV180136782
OATN01002825
30573
Bacillota
CGA
Ser
>WENV180136527
OATN01000057
464162
Bacillota
GTG
His
>WENV180136551
OATN01000078
464161
Bacillota
TAC
Val
>WENV180136859
OATN01020666
274969
Bacillota
GAT
Ile
>WENV180136860
OATN01020666
30641
Bacillota
GCT
Ser
>WENV180136680
OATN01000332
464274
Bacillota
CAT
Met
>WENV180136744
OATN01001073
113042
Bacillota
CAA
Leu
>WENV180136426
OATN01000002
73370
Bacillota
TGA
Ser
>WENV180136429
OATN01000004
456820
Bacillota
CCA
Trp
>WENV180136679
OATN01000332
182209
Bacillota
GTA
Tyr
>WENV180136464
OATN01000013
451472
Bacillota
GTC
Asp
>WENV180136498
OATN01000033
451472
Bacillota
GTC
Asp
>WENV180136808
OATN01004652
456229
Bacillota
GGC
Ala
>WENV180136847
OATN01015610
456226
Bacillota
GTT
Asn
>WENV180136501
OATN01000033
282519
Bacillota
TGG
Pro
>WENV180136848
OATN01015610
12437
Bacillota
GGA
Ser
>WENV180136529
OATN01000057
464269
Bacillota
TTT
Lys
>WENV180136549
OATN01000078
464269
Bacillota
TTT
Lys
>WENV180136829
OATN01010270
655532
Bacillota
CCG
Arg
>WENV180136678
OATN01000332
464273
Bacillota
TGT
Thr
>WENV180136470
OATN01000015
218534
Bacillota
CAA
Leu
>WENV180136811
OATN01005839
655739
Bacillota
GTT
Asn
>WENV180136468
OATN01000013
73496
Bacillota
TAA
Leu
>WENV180136823
OATN01008760
457491
Bacillota
TGT
Thr
>WENV180136504
OATN01000033
31240
Bacillota
CGA
Ser
>WENV180136550
OATN01000078
660228
Bacillota
TTC
Glu
>WENV180136762
OATN01001572
466751
Bacillota
TGC
Ala
>WENV180136430
OATN01000004
282517
Bacillota
ACG
Arg
>WENV180136858
OATN01020647
72915
Bacillota
AAG
Leu
>WENV180136854
OATN01018773
780409
Bacillota
CCA
Trp
>WENV180136748
OATN01001176
655740
Bacillota
CTC
Glu
>WENV180136466
OATN01000013
660224
Bacillota
GCC
Gly
>WENV180136547
OATN01000078
660224
Bacillota
GCC
Gly
>WENV180136528
OATN01000057
660227
Bacillota
TTG
Gln
>WENV180136682
OATN01000332
282408
Bacillota
CAT
Met
>WENV180136502
OATN01000033
779402
Bacillota
TCC
Gly
>WENV180136810
OATN01005716
456227
Bacillota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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