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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV077679
AAFX01086580
349303
Alphaproteobacteria
GCC
Gly
>WENV077933
AAFX01128679
375044
Alphaproteobacteria
GCC
Gly
>WENV077941
AAFX01131843
375044
Alphaproteobacteria
GCC
Gly
>WENV077423
AAFX01036318
342732
Alphaproteobacteria
CCC
Gly
>WENV077184
AAFX01001996
340956
Alphaproteobacteria
TTG
Gln
>WENV077771
AAFX01104366
247224
Alphaproteobacteria
CGT
Thr
>WENV077668
AAFX01084042
345492
Alphaproteobacteria
TAC
Val
>WENV077643
AAFX01080170
81399
Alphaproteobacteria
GTA
Tyr
>WENV077936
AAFX01129571
131431
Alphaproteobacteria
GGG
Pro
>WENV077348
AAFX01024763
345454
Alphaproteobacteria
GGT
Thr
>WENV077842
AAFX01113746
239037
Alphaproteobacteria
TTT
Lys
>WENV077803
AAFX01109754
164825
Alphaproteobacteria
GAT
Ile
>WENV077363
AAFX01027354
164825
Alphaproteobacteria
GAT
Ile
>WENV077930
AAFX01127855
341164
Alphaproteobacteria
GCC
Gly
>WENV077625
AAFX01074907
237281
Alphaproteobacteria
CGT
Thr
>WENV077377
AAFX01028663
237281
Alphaproteobacteria
CGT
Thr
>WENV077855
AAFX01114736
289655
Alphaproteobacteria
GGC
Ala
>WENV077551
AAFX01059097
148402
Alphaproteobacteria
TCT
Arg
>WENV077665
AAFX01083333
259072
Alphaproteobacteria
CGC
Ala
>WENV077380
AAFX01028800
101826
Alphaproteobacteria
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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