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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV077668
AAFX01084042
380115
Alphaproteobacteria
TAC
Val
>WENV077380
AAFX01028800
122389
Alphaproteobacteria
TAG
Leu
>WENV077771
AAFX01104366
290391
Alphaproteobacteria
CGT
Thr
>WENV077705
AAFX01091226
257580
Alphaproteobacteria
CTT
Lys
>WENV077869
AAFX01116212
114633
Alphaproteobacteria
TAG
Leu
>WENV077898
AAFX01120634
26267
Alphaproteobacteria
TGA
Ser
>WENV077665
AAFX01083333
259352
Alphaproteobacteria
CGC
Ala
>WENV077333
AAFX01024130
161642
Alphaproteobacteria
CAT
Met
>WENV077423
AAFX01036318
377643
Alphaproteobacteria
CCC
Gly
>WENV077197
AAFX01004385
370955
Alphaproteobacteria
CAC
Val
>WENV077853
AAFX01114434
370955
Alphaproteobacteria
CAC
Val
>WENV077909
AAFX01123545
377106
Alphaproteobacteria
GTT
Asn
>WENV077792
AAFX01108289
404374
Alphaproteobacteria
>WENV077283
AAFX01016129
403773
Alphaproteobacteria
GCC
Gly
>WENV077854
AAFX01114575
7962
Alphaproteobacteria
GCT
Ser
>WENV077563
AAFX01062809
302791
Alphaproteobacteria
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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