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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>ENV09002733
ADGC01018808
408459
Bacillota
TTG
Gln
>ENV09002760
ADGC01022232
105993
Bacillota
GTA
Tyr
>ENV09002461
ADGC01002722
257968
Bacillota
GCC
Gly
>ENV09002527
ADGC01004738
296231
Bacillota
TGC
Ala
>ENV09002589
ADGC01007328
296231
Bacillota
TGC
Ala
>ENV09002591
ADGC01007329
296231
Bacillota
TGC
Ala
>ENV09002457
ADGC01002722
270438
Bacillota
TTT
Lys
>ENV09002626
ADGC01009662
286917
Bacillota
TGC
Ala
>ENV09002898
ADGC01042805
286917
Bacillota
TGC
Ala
>ENV09002513
ADGC01004022
91699
Bacillota
CAA
Leu
>ENV09002751
ADGC01021588
47790
Bacillota
TGA
Ser
>ENV09002424
ADGC01001665
189541
Bacillota
GTC
Asp
>ENV09002950
ADGC01051143
160422
Bacillota
TCT
Arg
>ENV09002649
ADGC01011027
159089
Bacillota
GAT
Ile
>ENV09002506
ADGC01003519
257812
Bacillota
TGC
Ala
>ENV09002836
ADGC01032593
257812
Bacillota
TGC
Ala
>ENV09002679
ADGC01012189
261358
Bacillota
GAA
Phe
>ENV09002412
ADGC01001411
200602
Bacillota
>ENV09002869
ADGC01037953
369773
Bacillota
TTC
Glu
>ENV09002882
ADGC01039937
89802
Bacillota
GAG
Leu
>ENV09002604
ADGC01008226
376229
Bacillota
CTC
Glu
>ENV09002605
ADGC01008226
376229
Bacillota
CTC
Glu
>ENV09002606
ADGC01008226
376229
Bacillota
CTC
Glu
>ENV09002666
ADGC01011270
452372
Bacillota
CCA
Trp
>ENV09002935
ADGC01050027
210830
Bacillota
TCT
Arg
>ENV09002658
ADGC01011102
223271
Bacillota
>ENV09002776
ADGC01023601
269010
Bacillota
TGC
Ala
>ENV09002418
ADGC01001665
162486
Bacillota
GAT
Ile
>ENV09002731
ADGC01018808
237000
Bacillota
TCT
Arg
>ENV09002478
ADGC01002934
159345
Bacillota
GAT
Ile
>ENV09002486
ADGC01003232
159345
Bacillota
GAT
Ile
>ENV09002459
ADGC01002722
222762
Bacillota
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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