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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170014104
AVFP01008219
148353
Alphaproteobacteria
CAT
Met
>WENV170014002
AVFP01001422
165266
Alphaproteobacteria
CAT
Met
>WENV170014040
AVFP01003136
23620
Alphaproteobacteria
GCT
Ser
>WENV170014045
AVFP01003455
377852
Alphaproteobacteria
TGT
Thr
>WENV170014010
AVFP01001670
294226
Alphaproteobacteria
>WENV170014153
AVFP01027164
237281
Alphaproteobacteria
CGT
Thr
>WENV170014127
AVFP01013828
338760
Alphaproteobacteria
GAA
Phe
>WENV170014031
AVFP01002467
424918
Alphaproteobacteria
TCC
Gly
>WENV170014033
AVFP01002786
339606
Alphaproteobacteria
>WENV170014009
AVFP01001663
342846
Alphaproteobacteria
GAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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