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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170026113
CDTW01017533
293317
Actinomycetota
GGC
Ala
>WENV170025938
CDTW01004476
211952
Actinomycetota
ACG
Arg
>WENV170025939
CDTW01004476
211952
Actinomycetota
ACG
Arg
>WENV170026331
CDTW01034667
139249
Actinomycetota
GTC
Asp
>WENV170026206
CDTW01026127
58412
Actinomycetota
CGA
Ser
>WENV170026565
CDTW01051079
167861
Actinomycetota
CAA
Leu
>WENV170026277
CDTW01031386
133430
Actinomycetota
TAA
Leu
>WENV170026522
CDTW01047894
133430
Actinomycetota
TAA
Leu
>WENV170026177
CDTW01023631
371214
Actinomycetota
GTT
Asn
>WENV170026088
CDTW01015261
162414
Actinomycetota
GAT
Ile
>WENV170026439
CDTW01040563
161193
Actinomycetota
CTT
Lys
>WENV170026492
CDTW01045949
380164
Actinomycetota
TGT
Thr
>WENV170026392
CDTW01038000
261307
Actinomycetota
TAC
Val
>WENV170025874
CDTW01000860
183611
Actinomycetota
GGG
Pro
>WENV170025934
CDTW01003852
257872
Actinomycetota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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