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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170025911
CDTW01002195
370534
Verrucomicrobiota
TGT
Thr
>WENV170026080
CDTW01014827
370537
Verrucomicrobiota
CCG
Arg
>WENV170026108
CDTW01016929
88984
Verrucomicrobiota
GTA
Tyr
>WENV170025913
CDTW01002197
448769
Verrucomicrobiota
TCC
Gly
>WENV170026026
CDTW01011431
88983
Verrucomicrobiota
TAA
Leu
>WENV170026258
CDTW01029180
26467
Verrucomicrobiota
GGA
Ser
>WENV170026007
CDTW01009704
65261
Verrucomicrobiota
CAG
Leu
>WENV170026586
CDTW01052090
370530
Verrucomicrobiota
TAC
Val
>WENV170026427
CDTW01040130
370526
Verrucomicrobiota
CTG
Gln
>WENV170025948
CDTW01005082
50031
Verrucomicrobiota
TGA
Ser
>WENV170026411
CDTW01039252
260058
Verrucomicrobiota
GGC
Ala
>WENV170026520
CDTW01047744
88985
Verrucomicrobiota
AAG
Leu
>WENV170026074
CDTW01014442
8030
Verrucomicrobiota
CGA
Ser
>WENV170026412
CDTW01039252
370525
Verrucomicrobiota
TTG
Gln
>WENV170026228
CDTW01027501
8029
Verrucomicrobiota
GCT
Ser
>WENV170025989
CDTW01008323
139132
Verrucomicrobiota
GTC
Asp
>WENV170026281
CDTW01031837
139132
Verrucomicrobiota
GTC
Asp
>WENV170025981
CDTW01007879
370538
Verrucomicrobiota
CGT
Thr
>WENV170026519
CDTW01047744
260061
Verrucomicrobiota
>WENV170025915
CDTW01002197
161141
Verrucomicrobiota
TGG
Pro
>WENV170026027
CDTW01011431
260057
Verrucomicrobiota
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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