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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170026528
CDTW01047926
119661
Verrucomicrobiota
CAA
Leu
>WENV170026461
CDTW01042559
155256
Verrucomicrobiota
TCT
Arg
>WENV170025990
CDTW01008326
246701
Verrucomicrobiota
TTT
Lys
>WENV170026412
CDTW01039252
345141
Verrucomicrobiota
TTG
Gln
>WENV170026264
CDTW01029512
345133
Verrucomicrobiota
GAC
Val
>WENV170026108
CDTW01016929
82054
Verrucomicrobiota
GTA
Tyr
>WENV170025983
CDTW01007879
246677
Verrucomicrobiota
CTT
Lys
>WENV170025982
CDTW01007879
246677
Verrucomicrobiota
CTT
Lys
>WENV170026078
CDTW01014826
344844
Verrucomicrobiota
GCA
Cys
>WENV170025959
CDTW01005762
344844
Verrucomicrobiota
GCA
Cys
>WENV170026542
CDTW01049076
155264
Verrucomicrobiota
GGG
Pro
>WENV170026427
CDTW01040130
344845
Verrucomicrobiota
CTG
Gln
>WENV170026281
CDTW01031837
128202
Verrucomicrobiota
GTC
Asp
>WENV170025989
CDTW01008323
128202
Verrucomicrobiota
GTC
Asp
>WENV170025912
CDTW01002197
414625
Verrucomicrobiota
CCC
Gly
>WENV170025948
CDTW01005082
46246
Verrucomicrobiota
TGA
Ser
>WENV170026021
CDTW01011006
97755
Verrucomicrobiota
TAG
Leu
>WENV170026517
CDTW01047744
246700
Verrucomicrobiota
TTC
Glu
>WENV170026079
CDTW01014826
246700
Verrucomicrobiota
TTC
Glu
>WENV170025960
CDTW01005762
246700
Verrucomicrobiota
TTC
Glu
>WENV170026001
CDTW01009212
246687
Verrucomicrobiota
CGC
Ala
>WENV170026086
CDTW01015220
344841
Verrucomicrobiota
CAC
Val
>WENV170026007
CDTW01009704
60880
Verrucomicrobiota
CAG
Leu
>WENV170026026
CDTW01011431
82056
Verrucomicrobiota
TAA
Leu
>WENV170025981
CDTW01007879
344842
Verrucomicrobiota
CGT
Thr
>WENV170026137
CDTW01019052
170105
Verrucomicrobiota
CAT
Met
>WENV170026505
CDTW01046675
287733
Verrucomicrobiota
CCA
Trp
>WENV170025911
CDTW01002195
345123
Verrucomicrobiota
TGT
Thr
>WENV170026358
CDTW01036337
345110
Verrucomicrobiota
CCT
Arg
>WENV170026518
CDTW01047744
344839
Verrucomicrobiota
GTG
His
>WENV170026074
CDTW01014442
7274
Verrucomicrobiota
CGA
Ser
>WENV170026027
CDTW01011431
246260
Verrucomicrobiota
>WENV170026527
CDTW01047924
155268
Verrucomicrobiota
CGG
Pro
>WENV170025914
CDTW01002197
246728
Verrucomicrobiota
GAA
Phe
>WENV170026228
CDTW01027501
7256
Verrucomicrobiota
GCT
Ser
>WENV170025943
CDTW01004656
345115
Verrucomicrobiota
CAT
Met
>WENV170026586
CDTW01052090
345119
Verrucomicrobiota
TAC
Val
>WENV170026335
CDTW01034678
345124
Verrucomicrobiota
GTT
Asn
>WENV170026278
CDTW01031499
368497
Verrucomicrobiota
GCC
Gly
>WENV170026116
CDTW01017820
368497
Verrucomicrobiota
GCC
Gly
>WENV170026080
CDTW01014827
345142
Verrucomicrobiota
CCG
Arg
>WENV170026519
CDTW01047744
246709
Verrucomicrobiota
CAT
Met
>WENV170025915
CDTW01002197
154693
Verrucomicrobiota
TGG
Pro
>WENV170026504
CDTW01046675
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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