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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170036640
CDYN01020068
119661
Verrucomicrobiota
CAA
Leu
>WENV170036010
CDYN01001851
155256
Verrucomicrobiota
TCT
Arg
>WENV170036590
CDYN01018625
246701
Verrucomicrobiota
TTT
Lys
>WENV170036141
CDYN01005726
345141
Verrucomicrobiota
TTG
Gln
>WENV170036544
CDYN01017539
345133
Verrucomicrobiota
GAC
Val
>WENV170035974
CDYN01001110
82054
Verrucomicrobiota
GTA
Tyr
>WENV170035998
CDYN01001716
246677
Verrucomicrobiota
CTT
Lys
>WENV170035997
CDYN01001716
246677
Verrucomicrobiota
CTT
Lys
>WENV170036003
CDYN01001716
344844
Verrucomicrobiota
GCA
Cys
>WENV170036642
CDYN01020068
155264
Verrucomicrobiota
GGG
Pro
>WENV170036423
CDYN01014255
155264
Verrucomicrobiota
GGG
Pro
>WENV170036115
CDYN01005183
344845
Verrucomicrobiota
CTG
Gln
>WENV170036591
CDYN01018625
128202
Verrucomicrobiota
GTC
Asp
>WENV170036240
CDYN01008842
128202
Verrucomicrobiota
GTC
Asp
>WENV170036643
CDYN01020068
414625
Verrucomicrobiota
CCC
Gly
>WENV170036424
CDYN01014255
414625
Verrucomicrobiota
CCC
Gly
>WENV170036545
CDYN01017539
46246
Verrucomicrobiota
TGA
Ser
>WENV170036641
CDYN01020068
97755
Verrucomicrobiota
TAG
Leu
>WENV170036004
CDYN01001716
246700
Verrucomicrobiota
TTC
Glu
>WENV170035999
CDYN01001716
246700
Verrucomicrobiota
TTC
Glu
>WENV170036445
CDYN01014623
246687
Verrucomicrobiota
CGC
Ala
>WENV170036645
CDYN01020068
419909
Verrucomicrobiota
TCC
Gly
>WENV170036420
CDYN01014255
419909
Verrucomicrobiota
TCC
Gly
>WENV170036614
CDYN01019176
344841
Verrucomicrobiota
CAC
Val
>WENV170036546
CDYN01017539
405704
Verrucomicrobiota
GCC
Gly
>WENV170036379
CDYN01012934
405704
Verrucomicrobiota
GCC
Gly
>WENV170036038
CDYN01002689
82056
Verrucomicrobiota
TAA
Leu
>WENV170035996
CDYN01001716
344842
Verrucomicrobiota
CGT
Thr
>WENV170036184
CDYN01007531
170105
Verrucomicrobiota
CAT
Met
>WENV170036648
CDYN01020068
345110
Verrucomicrobiota
CCT
Arg
>WENV170036000
CDYN01001716
344839
Verrucomicrobiota
GTG
His
>WENV170036189
CDYN01007739
155268
Verrucomicrobiota
CGG
Pro
>WENV170036646
CDYN01020068
246728
Verrucomicrobiota
GAA
Phe
>WENV170036421
CDYN01014255
246728
Verrucomicrobiota
GAA
Phe
>WENV170035981
CDYN01001184
7256
Verrucomicrobiota
GCT
Ser
>WENV170036547
CDYN01017539
345115
Verrucomicrobiota
CAT
Met
>WENV170035973
CDYN01001110
345124
Verrucomicrobiota
GTT
Asn
>WENV170036644
CDYN01020068
345142
Verrucomicrobiota
CCG
Arg
>WENV170036425
CDYN01014255
345142
Verrucomicrobiota
CCG
Arg
>WENV170036001
CDYN01001716
246709
Verrucomicrobiota
CAT
Met
>WENV170036647
CDYN01020068
154693
Verrucomicrobiota
TGG
Pro
>WENV170036422
CDYN01014255
154693
Verrucomicrobiota
TGG
Pro
>WENV170036539
CDYN01017372
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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