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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
58 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170041288
CDYT01007341
271702
Bacillota
TGT
Thr
>WENV170042093
CDYT01035021
172175
Bacillota
GAC
Val
>WENV170041296
CDYT01007802
261391
Bacillota
GTT
Asn
>WENV170041941
CDYT01029224
261391
Bacillota
GTT
Asn
>WENV170042017
CDYT01031857
261391
Bacillota
GTT
Asn
>WENV170041744
CDYT01022229
310538
Bacillota
TGT
Thr
>WENV170041985
CDYT01030959
162485
Bacillota
CAT
Met
>WENV170041891
CDYT01027780
162480
Bacillota
ACG
Arg
>WENV170041172
CDYT01003544
378043
Bacillota
>WENV170041630
CDYT01017827
182782
Bacillota
ACG
Arg
>WENV170041903
CDYT01028095
182782
Bacillota
ACG
Arg
>WENV170041899
CDYT01028053
269920
Bacillota
CGC
Ala
>WENV170041388
CDYT01010588
393129
Bacillota
CTC
Glu
>WENV170041839
CDYT01026185
392172
Bacillota
TTC
Glu
>WENV170041719
CDYT01021316
258854
Bacillota
TGC
Ala
>WENV170041606
CDYT01016878
448255
Bacillota
CTG
Gln
>WENV170041580
CDYT01015498
159234
Bacillota
CAC
Val
>WENV170041381
CDYT01010239
162688
Bacillota
GAT
Ile
>WENV170042022
CDYT01032079
162688
Bacillota
GAT
Ile
>WENV170042024
CDYT01032115
162688
Bacillota
GAT
Ile
>WENV170041289
CDYT01007341
107867
Bacillota
GTA
Tyr
>WENV170041205
CDYT01004806
162487
Bacillota
CGG
Pro
>WENV170041310
CDYT01008347
161895
Bacillota
GAC
Val
>WENV170041672
CDYT01019390
161895
Bacillota
GAC
Val
>WENV170041083
CDYT01001111
133221
Bacillota
CAA
Leu
>WENV170041478
CDYT01012714
261284
Bacillota
CTT
Lys
>WENV170041990
CDYT01031142
261284
Bacillota
CTT
Lys
>WENV170041528
CDYT01013741
371263
Bacillota
TTG
Gln
>WENV170042154
CDYT01036967
158271
Bacillota
CCT
Arg
>WENV170042155
CDYT01036975
158271
Bacillota
CCT
Arg
>WENV170041536
CDYT01013805
56553
Bacillota
CAG
Leu
>WENV170041966
CDYT01029915
56553
Bacillota
CAG
Leu
>WENV170041284
CDYT01007224
166292
Bacillota
GAT
Ile
>WENV170041582
CDYT01015553
271703
Bacillota
GTG
His
>WENV170041873
CDYT01027498
311391
Bacillota
>WENV170041189
CDYT01004337
450457
Bacillota
CTG
Gln
>WENV170041824
CDYT01025100
450457
Bacillota
CTG
Gln
>WENV170041283
CDYT01007224
320672
Bacillota
TGC
Ala
>WENV170041355
CDYT01009276
448256
Bacillota
TTG
Gln
>WENV170041825
CDYT01025329
448256
Bacillota
TTG
Gln
>WENV170042044
CDYT01032913
167205
Bacillota
TAC
Val
>WENV170042118
CDYT01036196
167205
Bacillota
TAC
Val
>WENV170041370
CDYT01009683
261584
Bacillota
>WENV170041321
CDYT01008669
125410
Bacillota
TAG
Leu
>WENV170041597
CDYT01016127
369521
Bacillota
CTC
Glu
>WENV170042081
CDYT01034624
257976
Bacillota
CCC
Gly
>WENV170041611
CDYT01017260
172176
Bacillota
TGG
Pro
>WENV170041743
CDYT01022201
276063
Bacillota
CTC
Glu
>WENV170041798
CDYT01023784
159345
Bacillota
GAT
Ile
>WENV170041577
CDYT01015426
258131
Bacillota
TGT
Thr
>WENV170041799
CDYT01023809
258131
Bacillota
TGT
Thr
>WENV170041149
CDYT01002971
71745
Bacillota
TAA
Leu
>WENV170041320
CDYT01008669
292274
Bacillota
TTT
Lys
>WENV170041359
CDYT01009397
292274
Bacillota
TTT
Lys
>WENV170041526
CDYT01013741
162488
Bacillota
TCT
Arg
>WENV170042043
CDYT01032877
172178
Bacillota
GGG
Pro
>WENV170041061
CDYT01000584
261470
Bacillota
GTT
Asn
>WENV170041665
CDYT01019330
261470
Bacillota
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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