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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170043944
CDYU01053175
235146
Actinomycetota
CGT
Thr
>WENV170042760
CDYU01016671
119475
Actinomycetota
TAA
Leu
>WENV170042963
CDYU01022834
144589
Actinomycetota
ACG
Arg
>WENV170042964
CDYU01022834
144589
Actinomycetota
ACG
Arg
>WENV170043536
CDYU01040687
144589
Actinomycetota
ACG
Arg
>WENV170043537
CDYU01040687
144589
Actinomycetota
ACG
Arg
>WENV170043287
CDYU01034239
37070
Actinomycetota
CGA
Ser
>WENV170043867
CDYU01051557
235092
Actinomycetota
CCG
Arg
>WENV170043808
CDYU01049611
162208
Actinomycetota
TAC
Val
>WENV170043288
CDYU01034239
16219
Actinomycetota
GCT
Ser
>WENV170043854
CDYU01051160
235174
Actinomycetota
TGC
Ala
>WENV170043774
CDYU01048208
235101
Actinomycetota
TTT
Lys
>WENV170042393
CDYU01006623
144625
Actinomycetota
GTC
Asp
>WENV170042391
CDYU01006623
144625
Actinomycetota
GTC
Asp
>WENV170043123
CDYU01028446
235199
Actinomycetota
CAC
Val
>WENV170042562
CDYU01011489
413665
Actinomycetota
TTG
Gln
>WENV170044018
CDYU01055558
16223
Actinomycetota
GAG
Leu
>WENV170042431
CDYU01007536
144593
Actinomycetota
TAT
Ile
>WENV170042392
CDYU01006623
144593
Actinomycetota
TAT
Ile
>WENV170043116
CDYU01028115
238473
Actinomycetota
GTG
His
>WENV170042196
CDYU01000603
238473
Actinomycetota
GTG
His
>WENV170043290
CDYU01034239
98279
Actinomycetota
GTA
Tyr
>WENV170043237
CDYU01032469
338148
Actinomycetota
CTG
Gln
>WENV170042252
CDYU01003030
338148
Actinomycetota
CTG
Gln
>WENV170042650
CDYU01013839
235148
Actinomycetota
GTT
Asn
>WENV170042649
CDYU01013839
235148
Actinomycetota
GTT
Asn
>WENV170042643
CDYU01013839
235148
Actinomycetota
GTT
Asn
>WENV170043873
CDYU01051831
411554
Actinomycetota
CCC
Gly
>WENV170043167
CDYU01029962
411554
Actinomycetota
CCC
Gly
>WENV170042423
CDYU01007079
113601
Actinomycetota
TAG
Leu
>WENV170042761
CDYU01016671
144595
Actinomycetota
CAA
Leu
>WENV170042648
CDYU01013839
145343
Actinomycetota
GGG
Pro
>WENV170043868
CDYU01051731
235149
Actinomycetota
CCT
Arg
>WENV170042422
CDYU01007079
235121
Actinomycetota
CGT
Thr
>WENV170042762
CDYU01016671
144635
Actinomycetota
TGG
Pro
>WENV170043872
CDYU01051831
80622
Actinomycetota
CAG
Leu
>WENV170043923
CDYU01052813
44851
Actinomycetota
TGA
Ser
>WENV170043292
CDYU01034239
44851
Actinomycetota
TGA
Ser
>WENV170043855
CDYU01051160
235173
Actinomycetota
GGC
Ala
>WENV170043135
CDYU01029033
235173
Actinomycetota
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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