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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170043292
CDYU01034239
50172
Actinomycetota
TGA
Ser
>WENV170043923
CDYU01052813
50172
Actinomycetota
TGA
Ser
>WENV170044018
CDYU01055558
19409
Actinomycetota
GAG
Leu
>WENV170042562
CDYU01011489
448096
Actinomycetota
TTG
Gln
>WENV170042650
CDYU01013839
261336
Actinomycetota
GTT
Asn
>WENV170042390
CDYU01006623
369047
Actinomycetota
TTC
Glu
>WENV170042761
CDYU01016671
167861
Actinomycetota
CAA
Leu
>WENV170042762
CDYU01016671
176608
Actinomycetota
TGG
Pro
>WENV170043236
CDYU01032469
279109
Actinomycetota
CTC
Glu
>WENV170043868
CDYU01051731
288631
Actinomycetota
CCT
Arg
>WENV170042391
CDYU01006623
161068
Actinomycetota
>WENV170042393
CDYU01006623
161068
Actinomycetota
>WENV170043987
CDYU01054648
182960
Actinomycetota
>WENV170042423
CDYU01007079
125238
Actinomycetota
TAG
Leu
>WENV170042963
CDYU01022834
158695
Actinomycetota
ACG
Arg
>WENV170042964
CDYU01022834
158695
Actinomycetota
ACG
Arg
>WENV170043536
CDYU01040687
158695
Actinomycetota
ACG
Arg
>WENV170043537
CDYU01040687
158695
Actinomycetota
ACG
Arg
>WENV170043134
CDYU01029033
448092
Actinomycetota
TTG
Gln
>WENV170043287
CDYU01034239
43294
Actinomycetota
CGA
Ser
>WENV170043944
CDYU01053175
257872
Actinomycetota
CGT
Thr
>WENV170043291
CDYU01034239
158694
Actinomycetota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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