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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170042891
CDYU01020153
119661
Verrucomicrobiota
CAA
Leu
>WENV170043849
CDYU01050900
155256
Verrucomicrobiota
TCT
Arg
>WENV170043633
CDYU01044090
246701
Verrucomicrobiota
TTT
Lys
>WENV170044114
CDYU01058417
345141
Verrucomicrobiota
TTG
Gln
>WENV170042216
CDYU01001540
345133
Verrucomicrobiota
GAC
Val
>WENV170042262
CDYU01003377
82054
Verrucomicrobiota
GTA
Tyr
>WENV170044098
CDYU01057953
246677
Verrucomicrobiota
CTT
Lys
>WENV170044097
CDYU01057953
246677
Verrucomicrobiota
CTT
Lys
>WENV170044096
CDYU01057953
246677
Verrucomicrobiota
CTT
Lys
>WENV170042213
CDYU01001465
246677
Verrucomicrobiota
CTT
Lys
>WENV170042212
CDYU01001465
246677
Verrucomicrobiota
CTT
Lys
>WENV170043779
CDYU01048212
344844
Verrucomicrobiota
GCA
Cys
>WENV170042557
CDYU01011208
155264
Verrucomicrobiota
GGG
Pro
>WENV170043740
CDYU01047275
344845
Verrucomicrobiota
CTG
Gln
>WENV170044060
CDYU01056934
128202
Verrucomicrobiota
GTC
Asp
>WENV170042702
CDYU01015260
128202
Verrucomicrobiota
GTC
Asp
>WENV170042887
CDYU01020147
414625
Verrucomicrobiota
CCC
Gly
>WENV170042749
CDYU01016234
46246
Verrucomicrobiota
TGA
Ser
>WENV170042236
CDYU01002400
97755
Verrucomicrobiota
TAG
Leu
>WENV170043950
CDYU01053346
246700
Verrucomicrobiota
TTC
Glu
>WENV170043780
CDYU01048212
246700
Verrucomicrobiota
TTC
Glu
>WENV170043718
CDYU01046377
246700
Verrucomicrobiota
TTC
Glu
>WENV170043686
CDYU01045541
246700
Verrucomicrobiota
TTC
Glu
>WENV170042907
CDYU01021121
347038
Verrucomicrobiota
GCC
Gly
>WENV170043065
CDYU01025969
246687
Verrucomicrobiota
CGC
Ala
>WENV170042888
CDYU01020147
419909
Verrucomicrobiota
TCC
Gly
>WENV170043546
CDYU01041061
82056
Verrucomicrobiota
TAA
Leu
>WENV170044095
CDYU01057953
344842
Verrucomicrobiota
CGT
Thr
>WENV170042446
CDYU01007989
170105
Verrucomicrobiota
CAT
Met
>WENV170043919
CDYU01052806
345123
Verrucomicrobiota
TGT
Thr
>WENV170043277
CDYU01033832
345110
Verrucomicrobiota
CCT
Arg
>WENV170043687
CDYU01045541
344839
Verrucomicrobiota
GTG
His
>WENV170042794
CDYU01017152
155268
Verrucomicrobiota
CGG
Pro
>WENV170042558
CDYU01011208
246728
Verrucomicrobiota
GAA
Phe
>WENV170042599
CDYU01012569
7256
Verrucomicrobiota
GCT
Ser
>WENV170042906
CDYU01021121
345115
Verrucomicrobiota
CAT
Met
>WENV170042901
CDYU01020599
345119
Verrucomicrobiota
TAC
Val
>WENV170042261
CDYU01003377
345124
Verrucomicrobiota
GTT
Asn
>WENV170043513
CDYU01040165
345142
Verrucomicrobiota
CCG
Arg
>WENV170043688
CDYU01045541
246709
Verrucomicrobiota
CAT
Met
>WENV170042559
CDYU01011208
154693
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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