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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
49 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170061815
CDZI01065235
119661
Verrucomicrobiota
CAA
Leu
>WENV170061046
CDZI01031636
155256
Verrucomicrobiota
TCT
Arg
>WENV170061045
CDZI01031636
246701
Verrucomicrobiota
TTT
Lys
>WENV170060505
CDZI01006342
345141
Verrucomicrobiota
TTG
Gln
>WENV170061711
CDZI01060447
345133
Verrucomicrobiota
GAC
Val
>WENV170061423
CDZI01048448
82054
Verrucomicrobiota
GTA
Tyr
>WENV170061630
CDZI01057003
246677
Verrucomicrobiota
CTT
Lys
>WENV170061629
CDZI01057003
246677
Verrucomicrobiota
CTT
Lys
>WENV170061628
CDZI01057003
246677
Verrucomicrobiota
CTT
Lys
>WENV170061627
CDZI01057003
246677
Verrucomicrobiota
CTT
Lys
>WENV170060354
CDZI01000042
246677
Verrucomicrobiota
CTT
Lys
>WENV170060353
CDZI01000042
246677
Verrucomicrobiota
CTT
Lys
>WENV170060352
CDZI01000042
246677
Verrucomicrobiota
CTT
Lys
>WENV170061632
CDZI01057003
344844
Verrucomicrobiota
GCA
Cys
>WENV170061107
CDZI01034469
155264
Verrucomicrobiota
GGG
Pro
>WENV170061710
CDZI01060447
344845
Verrucomicrobiota
CTG
Gln
>WENV170061709
CDZI01060447
128202
Verrucomicrobiota
GTC
Asp
>WENV170061433
CDZI01049028
128202
Verrucomicrobiota
GTC
Asp
>WENV170061108
CDZI01034469
414625
Verrucomicrobiota
CCC
Gly
>WENV170062002
CDZI01073394
46246
Verrucomicrobiota
TGA
Ser
>WENV170061816
CDZI01065235
97755
Verrucomicrobiota
TAG
Leu
>WENV170061633
CDZI01057003
246700
Verrucomicrobiota
TTC
Glu
>WENV170060948
CDZI01027026
246700
Verrucomicrobiota
TTC
Glu
>WENV170061635
CDZI01057003
246687
Verrucomicrobiota
CGC
Ala
>WENV170061104
CDZI01034469
419909
Verrucomicrobiota
TCC
Gly
>WENV170061533
CDZI01053927
344841
Verrucomicrobiota
CAC
Val
>WENV170061531
CDZI01053927
405704
Verrucomicrobiota
GCC
Gly
>WENV170061503
CDZI01051952
405704
Verrucomicrobiota
GCC
Gly
>WENV170061818
CDZI01065235
82056
Verrucomicrobiota
TAA
Leu
>WENV170060351
CDZI01000042
344842
Verrucomicrobiota
CGT
Thr
>WENV170061424
CDZI01048448
170105
Verrucomicrobiota
CAT
Met
>WENV170060531
CDZI01006946
287733
Verrucomicrobiota
CCA
Trp
>WENV170061634
CDZI01057003
345123
Verrucomicrobiota
TGT
Thr
>WENV170061817
CDZI01065235
345110
Verrucomicrobiota
CCT
Arg
>WENV170060949
CDZI01027026
344839
Verrucomicrobiota
GTG
His
>WENV170061059
CDZI01032221
7274
Verrucomicrobiota
CGA
Ser
>WENV170061819
CDZI01065235
246260
Verrucomicrobiota
>WENV170060348
CDZI01000042
155268
Verrucomicrobiota
CGG
Pro
>WENV170061631
CDZI01057003
82181
Verrucomicrobiota
AAG
Leu
>WENV170061105
CDZI01034469
246728
Verrucomicrobiota
GAA
Phe
>WENV170061820
CDZI01065235
7256
Verrucomicrobiota
GCT
Ser
>WENV170062003
CDZI01073394
345115
Verrucomicrobiota
CAT
Met
>WENV170061708
CDZI01060447
345119
Verrucomicrobiota
TAC
Val
>WENV170061422
CDZI01048448
345124
Verrucomicrobiota
GTT
Asn
>WENV170061434
CDZI01049028
17023
Verrucomicrobiota
GGA
Ser
>WENV170061044
CDZI01031636
345142
Verrucomicrobiota
CCG
Arg
>WENV170060950
CDZI01027026
246709
Verrucomicrobiota
CAT
Met
>WENV170061106
CDZI01034469
154693
Verrucomicrobiota
TGG
Pro
>WENV170060530
CDZI01006946
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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