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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
46 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170100908
CEAR01010991
119661
Verrucomicrobiota
CAA
Leu
>WENV170101088
CEAR01018600
155256
Verrucomicrobiota
TCT
Arg
>WENV170101087
CEAR01018600
246701
Verrucomicrobiota
TTT
Lys
>WENV170101771
CEAR01046651
345141
Verrucomicrobiota
TTG
Gln
>WENV170100763
CEAR01003169
345133
Verrucomicrobiota
GAC
Val
>WENV170100743
CEAR01002664
82054
Verrucomicrobiota
GTA
Tyr
>WENV170100682
CEAR01000389
246677
Verrucomicrobiota
CTT
Lys
>WENV170100681
CEAR01000389
246677
Verrucomicrobiota
CTT
Lys
>WENV170100680
CEAR01000389
246677
Verrucomicrobiota
CTT
Lys
>WENV170101344
CEAR01030003
344844
Verrucomicrobiota
GCA
Cys
>WENV170101938
CEAR01055357
155264
Verrucomicrobiota
GGG
Pro
>WENV170100762
CEAR01003169
344845
Verrucomicrobiota
CTG
Gln
>WENV170101086
CEAR01018600
128202
Verrucomicrobiota
GTC
Asp
>WENV170100761
CEAR01003169
128202
Verrucomicrobiota
GTC
Asp
>WENV170101432
CEAR01032619
414625
Verrucomicrobiota
CCC
Gly
>WENV170100697
CEAR01000916
46246
Verrucomicrobiota
TGA
Ser
>WENV170100779
CEAR01003650
97755
Verrucomicrobiota
TAG
Leu
>WENV170101345
CEAR01030003
246700
Verrucomicrobiota
TTC
Glu
>WENV170100699
CEAR01000916
246700
Verrucomicrobiota
TTC
Glu
>WENV170101347
CEAR01030003
246687
Verrucomicrobiota
CGC
Ala
>WENV170101434
CEAR01032619
419909
Verrucomicrobiota
TCC
Gly
>WENV170101773
CEAR01046651
344841
Verrucomicrobiota
CAC
Val
>WENV170100933
CEAR01011991
60880
Verrucomicrobiota
CAG
Leu
>WENV170101591
CEAR01038492
82056
Verrucomicrobiota
TAA
Leu
>WENV170100679
CEAR01000389
344842
Verrucomicrobiota
CGT
Thr
>WENV170101843
CEAR01050062
170105
Verrucomicrobiota
CAT
Met
>WENV170101914
CEAR01053453
287733
Verrucomicrobiota
CCA
Trp
>WENV170101346
CEAR01030003
345123
Verrucomicrobiota
TGT
Thr
>WENV170100778
CEAR01003650
345110
Verrucomicrobiota
CCT
Arg
>WENV170100700
CEAR01000916
344839
Verrucomicrobiota
GTG
His
>WENV170101487
CEAR01034570
7274
Verrucomicrobiota
CGA
Ser
>WENV170101592
CEAR01038492
246260
Verrucomicrobiota
>WENV170100678
CEAR01000389
155268
Verrucomicrobiota
CGG
Pro
>WENV170101589
CEAR01038488
82181
Verrucomicrobiota
AAG
Leu
>WENV170101280
CEAR01027146
246728
Verrucomicrobiota
GAA
Phe
>WENV170101593
CEAR01038492
7256
Verrucomicrobiota
GCT
Ser
>WENV170100702
CEAR01000916
345115
Verrucomicrobiota
CAT
Met
>WENV170101974
CEAR01057143
345119
Verrucomicrobiota
TAC
Val
>WENV170100742
CEAR01002664
345124
Verrucomicrobiota
GTT
Asn
>WENV170101112
CEAR01020812
17023
Verrucomicrobiota
GGA
Ser
>WENV170101770
CEAR01046651
368497
Verrucomicrobiota
GCC
Gly
>WENV170100698
CEAR01000916
368497
Verrucomicrobiota
GCC
Gly
>WENV170101433
CEAR01032619
345142
Verrucomicrobiota
CCG
Arg
>WENV170100701
CEAR01000916
246709
Verrucomicrobiota
CAT
Met
>WENV170101281
CEAR01027146
154693
Verrucomicrobiota
TGG
Pro
>WENV170101913
CEAR01053453
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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