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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
48 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170108277
CECA01021402
119661
Verrucomicrobiota
CAA
Leu
>WENV170108036
CECA01006496
155256
Verrucomicrobiota
TCT
Arg
>WENV170108560
CECA01036240
246701
Verrucomicrobiota
TTT
Lys
>WENV170108886
CECA01051446
345141
Verrucomicrobiota
TTG
Gln
>WENV170108067
CECA01009348
345133
Verrucomicrobiota
GAC
Val
>WENV170108990
CECA01056297
82054
Verrucomicrobiota
GTA
Tyr
>WENV170108012
CECA01004821
246677
Verrucomicrobiota
CTT
Lys
>WENV170108011
CECA01004821
246677
Verrucomicrobiota
CTT
Lys
>WENV170108010
CECA01004821
246677
Verrucomicrobiota
CTT
Lys
>WENV170108009
CECA01004821
246677
Verrucomicrobiota
CTT
Lys
>WENV170109393
CECA01076353
344844
Verrucomicrobiota
GCA
Cys
>WENV170108869
CECA01050716
155264
Verrucomicrobiota
GGG
Pro
>WENV170108066
CECA01009348
344845
Verrucomicrobiota
CTG
Gln
>WENV170108702
CECA01042298
128202
Verrucomicrobiota
GTC
Asp
>WENV170108559
CECA01036240
128202
Verrucomicrobiota
GTC
Asp
>WENV170108068
CECA01009348
128202
Verrucomicrobiota
GTC
Asp
>WENV170108512
CECA01033147
414625
Verrucomicrobiota
CCC
Gly
>WENV170108246
CECA01019704
46246
Verrucomicrobiota
TGA
Ser
>WENV170108723
CECA01043307
97755
Verrucomicrobiota
TAG
Leu
>WENV170109394
CECA01076353
246700
Verrucomicrobiota
TTC
Glu
>WENV170108248
CECA01019704
246700
Verrucomicrobiota
TTC
Glu
>WENV170109218
CECA01069737
246687
Verrucomicrobiota
CGC
Ala
>WENV170108514
CECA01033147
419909
Verrucomicrobiota
TCC
Gly
>WENV170108705
CECA01042734
344841
Verrucomicrobiota
CAC
Val
>WENV170109348
CECA01074576
60880
Verrucomicrobiota
CAG
Leu
>WENV170108755
CECA01045162
82056
Verrucomicrobiota
TAA
Leu
>WENV170108008
CECA01004821
344842
Verrucomicrobiota
CGT
Thr
>WENV170108942
CECA01054563
170105
Verrucomicrobiota
CAT
Met
>WENV170108147
CECA01014226
287733
Verrucomicrobiota
CCA
Trp
>WENV170109217
CECA01069737
345123
Verrucomicrobiota
TGT
Thr
>WENV170108722
CECA01043307
345110
Verrucomicrobiota
CCT
Arg
>WENV170107944
CECA01001139
344839
Verrucomicrobiota
GTG
His
>WENV170108401
CECA01028636
7274
Verrucomicrobiota
CGA
Ser
>WENV170108756
CECA01045162
246260
Verrucomicrobiota
>WENV170108005
CECA01004821
155268
Verrucomicrobiota
CGG
Pro
>WENV170108721
CECA01043306
82181
Verrucomicrobiota
AAG
Leu
>WENV170107988
CECA01003623
246728
Verrucomicrobiota
GAA
Phe
>WENV170108757
CECA01045162
7256
Verrucomicrobiota
GCT
Ser
>WENV170108249
CECA01019704
345115
Verrucomicrobiota
CAT
Met
>WENV170109331
CECA01073498
345119
Verrucomicrobiota
TAC
Val
>WENV170108989
CECA01056297
345124
Verrucomicrobiota
GTT
Asn
>WENV170108375
CECA01026930
17023
Verrucomicrobiota
GGA
Ser
>WENV170109068
CECA01060220
368497
Verrucomicrobiota
GCC
Gly
>WENV170108247
CECA01019704
368497
Verrucomicrobiota
GCC
Gly
>WENV170108513
CECA01033147
345142
Verrucomicrobiota
CCG
Arg
>WENV170107945
CECA01001139
246709
Verrucomicrobiota
CAT
Met
>WENV170107989
CECA01003623
154693
Verrucomicrobiota
TGG
Pro
>WENV170108146
CECA01014226
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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