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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
51 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170110500
CECF01030950
119661
Verrucomicrobiota
CAA
Leu
>WENV170110162
CECF01013111
155256
Verrucomicrobiota
TCT
Arg
>WENV170111221
CECF01066236
246701
Verrucomicrobiota
TTT
Lys
>WENV170110566
CECF01033603
345141
Verrucomicrobiota
TTG
Gln
>WENV170111025
CECF01056065
345133
Verrucomicrobiota
GAC
Val
>WENV170110766
CECF01043400
82054
Verrucomicrobiota
GTA
Tyr
>WENV170111007
CECF01055019
246677
Verrucomicrobiota
CTT
Lys
>WENV170111006
CECF01055019
246677
Verrucomicrobiota
CTT
Lys
>WENV170111005
CECF01055019
246677
Verrucomicrobiota
CTT
Lys
>WENV170109850
CECF01000021
246677
Verrucomicrobiota
CTT
Lys
>WENV170109849
CECF01000021
246677
Verrucomicrobiota
CTT
Lys
>WENV170109848
CECF01000021
246677
Verrucomicrobiota
CTT
Lys
>WENV170109887
CECF01001624
344844
Verrucomicrobiota
GCA
Cys
>WENV170111202
CECF01065075
155264
Verrucomicrobiota
GGG
Pro
>WENV170111241
CECF01066820
344845
Verrucomicrobiota
CTG
Gln
>WENV170111242
CECF01066820
128202
Verrucomicrobiota
GTC
Asp
>WENV170111222
CECF01066236
128202
Verrucomicrobiota
GTC
Asp
>WENV170109936
CECF01003891
414625
Verrucomicrobiota
CCC
Gly
>WENV170110342
CECF01022738
46246
Verrucomicrobiota
TGA
Ser
>WENV170110058
CECF01008737
97755
Verrucomicrobiota
TAG
Leu
>WENV170109888
CECF01001624
246700
Verrucomicrobiota
TTC
Glu
>WENV170109863
CECF01000559
246700
Verrucomicrobiota
TTC
Glu
>WENV170111295
CECF01069508
246687
Verrucomicrobiota
CGC
Ala
>WENV170109938
CECF01003891
419909
Verrucomicrobiota
TCC
Gly
>WENV170110785
CECF01044561
344841
Verrucomicrobiota
CAC
Val
>WENV170110099
CECF01010411
60880
Verrucomicrobiota
CAG
Leu
>WENV170110707
CECF01040691
82056
Verrucomicrobiota
TAA
Leu
>WENV170111004
CECF01055019
344842
Verrucomicrobiota
CGT
Thr
>WENV170109847
CECF01000021
344842
Verrucomicrobiota
CGT
Thr
>WENV170110337
CECF01022285
170105
Verrucomicrobiota
CAT
Met
>WENV170110874
CECF01048955
287733
Verrucomicrobiota
CCA
Trp
>WENV170109889
CECF01001624
345123
Verrucomicrobiota
TGT
Thr
>WENV170110059
CECF01008737
345110
Verrucomicrobiota
CCT
Arg
>WENV170109864
CECF01000559
344839
Verrucomicrobiota
GTG
His
>WENV170111266
CECF01067922
7274
Verrucomicrobiota
CGA
Ser
>WENV170110708
CECF01040691
246260
Verrucomicrobiota
>WENV170111003
CECF01055019
155268
Verrucomicrobiota
CGG
Pro
>WENV170109844
CECF01000021
155268
Verrucomicrobiota
CGG
Pro
>WENV170110788
CECF01044569
82181
Verrucomicrobiota
AAG
Leu
>WENV170111042
CECF01056673
246728
Verrucomicrobiota
GAA
Phe
>WENV170110709
CECF01040691
7256
Verrucomicrobiota
GCT
Ser
>WENV170110343
CECF01022738
345115
Verrucomicrobiota
CAT
Met
>WENV170110862
CECF01048369
345119
Verrucomicrobiota
TAC
Val
>WENV170110776
CECF01044020
345124
Verrucomicrobiota
GTT
Asn
>WENV170110618
CECF01036454
17023
Verrucomicrobiota
GGA
Ser
>WENV170110586
CECF01034746
368497
Verrucomicrobiota
GCC
Gly
>WENV170109862
CECF01000559
368497
Verrucomicrobiota
GCC
Gly
>WENV170109937
CECF01003891
345142
Verrucomicrobiota
CCG
Arg
>WENV170109865
CECF01000559
246709
Verrucomicrobiota
CAT
Met
>WENV170111043
CECF01056673
154693
Verrucomicrobiota
TGG
Pro
>WENV170110873
CECF01048955
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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