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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170121404
CENM01001473
237493
Alphaproteobacteria
CCA
Trp
>WENV170121449
CENM01024260
10665
Alphaproteobacteria
GCT
Ser
>WENV170121475
CENM01029838
339724
Alphaproteobacteria
TTG
Gln
>WENV170121444
CENM01023594
254188
Alphaproteobacteria
CCA
Trp
>WENV170121442
CENM01022130
339290
Alphaproteobacteria
GGT
Thr
>WENV170121461
CENM01026695
160251
Alphaproteobacteria
CAT
Met
>WENV170121484
CENM01032780
283763
Alphaproteobacteria
TGC
Ala
>WENV170121479
CENM01030386
97145
Alphaproteobacteria
TAG
Leu
>WENV170121432
CENM01017245
339725
Alphaproteobacteria
GAA
Phe
>WENV170121467
CENM01028077
318048
Alphaproteobacteria
CCA
Trp
>WENV170121441
CENM01021405
369678
Alphaproteobacteria
GGT
Thr
>WENV170121493
CENM01035452
339606
Alphaproteobacteria
>WENV170121422
CENM01007465
147289
Alphaproteobacteria
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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