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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170122019
CENN01038186
451765
Gammaproteobacteria
GCA
Cys
>WENV170122694
CENN01165245
160859
Gammaproteobacteria
GGG
Pro
>WENV170122402
CENN01077049
65736
Gammaproteobacteria
TAA
Leu
>WENV170122770
CENN01186309
21308
Gammaproteobacteria
GGA
Ser
>WENV170121781
CENN01017395
172909
Gammaproteobacteria
>WENV170121785
CENN01017719
172909
Gammaproteobacteria
>WENV170121639
CENN01005291
278912
Gammaproteobacteria
CCA
Trp
>WENV170122401
CENN01077016
164285
Gammaproteobacteria
TCG
Arg
>WENV170121814
CENN01020224
263086
Gammaproteobacteria
GTT
Asn
>WENV170121984
CENN01035895
257590
Gammaproteobacteria
GGT
Thr
>WENV170122006
CENN01037084
257590
Gammaproteobacteria
GGT
Thr
>WENV170122337
CENN01071849
159956
Gammaproteobacteria
ACG
Arg
>WENV170121566
CENN01000430
105812
Gammaproteobacteria
GTA
Tyr
>WENV170121588
CENN01001919
105812
Gammaproteobacteria
GTA
Tyr
>WENV170122042
CENN01041484
105812
Gammaproteobacteria
GTA
Tyr
>WENV170122637
CENN01144206
261154
Gammaproteobacteria
TGC
Ala
>WENV170122064
CENN01043926
259519
Gammaproteobacteria
GGC
Ala
>WENV170121622
CENN01003620
265381
Gammaproteobacteria
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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