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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170126689
CENP01142787
477494
Gammaproteobacteria
TCC
Gly
>WENV170125950
CENP01078407
277410
Gammaproteobacteria
TTT
Lys
>WENV170124679
CENP01001461
309075
Gammaproteobacteria
GTT
Asn
>WENV170125662
CENP01060053
108980
Gammaproteobacteria
TAG
Leu
>WENV170124863
CENP01012580
262285
Gammaproteobacteria
TGC
Ala
>WENV170126160
CENP01094330
67015
Gammaproteobacteria
CAG
Leu
>WENV170126274
CENP01103349
67015
Gammaproteobacteria
CAG
Leu
>WENV170125015
CENP01020933
71882
Gammaproteobacteria
TAA
Leu
>WENV170127067
CENP01181136
65736
Gammaproteobacteria
TAA
Leu
>WENV170126539
CENP01125670
21308
Gammaproteobacteria
GGA
Ser
>WENV170125620
CENP01057893
229608
Gammaproteobacteria
CAT
Met
>WENV170125661
CENP01060053
279441
Gammaproteobacteria
GTG
His
>WENV170124732
CENP01005523
181192
Gammaproteobacteria
GAC
Val
>WENV170125127
CENP01029024
164285
Gammaproteobacteria
TCG
Arg
>WENV170127090
CENP01183023
263086
Gammaproteobacteria
GTT
Asn
>WENV170126451
CENP01117213
316791
Gammaproteobacteria
GAA
Phe
>WENV170124698
CENP01002490
323307
Gammaproteobacteria
GGT
Thr
>WENV170126133
CENP01092886
257590
Gammaproteobacteria
GGT
Thr
>WENV170127172
CENP01191130
307111
Gammaproteobacteria
TAC
Val
>WENV170127668
CENP01229799
448699
Gammaproteobacteria
GCA
Cys
>WENV170126795
CENP01151332
301409
Gammaproteobacteria
TGC
Ala
>WENV170126490
CENP01121241
226622
Gammaproteobacteria
GAC
Val
>WENV170124702
CENP01002679
471753
Gammaproteobacteria
GCA
Cys
>WENV170125096
CENP01027007
471753
Gammaproteobacteria
GCA
Cys
>WENV170126385
CENP01111624
471753
Gammaproteobacteria
GCA
Cys
>WENV170126617
CENP01133001
471753
Gammaproteobacteria
GCA
Cys
>WENV170124736
CENP01005734
105812
Gammaproteobacteria
GTA
Tyr
>WENV170126606
CENP01131511
105812
Gammaproteobacteria
GTA
Tyr
>WENV170128197
CENP01400937
261154
Gammaproteobacteria
TGC
Ala
>WENV170125432
CENP01046160
265381
Gammaproteobacteria
GTT
Asn
>WENV170124799
CENP01009659
236600
Gammaproteobacteria
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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