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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170126401
CENP01113620
17426
Gammaproteobacteria
GCT
Ser
>WENV170127493
CENP01216166
17426
Gammaproteobacteria
GCT
Ser
>WENV170125950
CENP01078407
244202
Gammaproteobacteria
TTT
Lys
>WENV170125854
CENP01071910
241476
Gammaproteobacteria
TTT
Lys
>WENV170126000
CENP01082404
171935
Gammaproteobacteria
ACG
Arg
>WENV170126269
CENP01102885
171935
Gammaproteobacteria
ACG
Arg
>WENV170127666
CENP01229752
171935
Gammaproteobacteria
ACG
Arg
>WENV170125543
CENP01053479
99112
Gammaproteobacteria
TAG
Leu
>WENV170125432
CENP01046160
240642
Gammaproteobacteria
GTT
Asn
>WENV170124732
CENP01005523
148148
Gammaproteobacteria
GAC
Val
>WENV170125011
CENP01020909
241230
Gammaproteobacteria
GAA
Phe
>WENV170127128
CENP01187525
173040
Gammaproteobacteria
GAC
Val
>WENV170125620
CENP01057893
145713
Gammaproteobacteria
CAT
Met
>WENV170128197
CENP01400937
250885
Gammaproteobacteria
TGC
Ala
>WENV170127282
CENP01199366
250885
Gammaproteobacteria
TGC
Ala
>WENV170126407
CENP01113833
425813
Gammaproteobacteria
GCA
Cys
>WENV170127049
CENP01179442
145491
Gammaproteobacteria
GGG
Pro
>WENV170126879
CENP01161504
186449
Gammaproteobacteria
TGG
Pro
>WENV170124672
CENP01000944
237421
Gammaproteobacteria
TGT
Thr
>WENV170126891
CENP01162427
257778
Gammaproteobacteria
TAC
Val
>WENV170125661
CENP01060053
245151
Gammaproteobacteria
GTG
His
>WENV170127668
CENP01229799
411735
Gammaproteobacteria
GCA
Cys
>WENV170125822
CENP01070097
45152
Gammaproteobacteria
GGA
Ser
>WENV170126032
CENP01084308
190809
Gammaproteobacteria
GGG
Pro
>WENV170124932
CENP01016765
190809
Gammaproteobacteria
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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