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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170133481
CENU01029001
340288
Alphaproteobacteria
GCC
Gly
>WENV170133553
CENU01032586
266073
Alphaproteobacteria
TTT
Lys
>WENV170133555
CENU01032664
200119
Alphaproteobacteria
CAT
Met
>WENV170133706
CENU01045091
266073
Alphaproteobacteria
TTT
Lys
>WENV170133863
CENU01059030
342876
Alphaproteobacteria
GAC
Val
>WENV170133868
CENU01059409
161002
Alphaproteobacteria
GTG
His
>WENV170133910
CENU01061434
412424
Alphaproteobacteria
TCC
Gly
>WENV170135075
CENU01172225
435528
Alphaproteobacteria
GCA
Cys
>WENV170135271
CENU01191704
199776
Alphaproteobacteria
CGG
Pro
>WENV170135274
CENU01191915
369678
Alphaproteobacteria
GGT
Thr
>WENV170135392
CENU01200195
266073
Alphaproteobacteria
TTT
Lys
>WENV170135560
CENU01205079
268598
Alphaproteobacteria
GAA
Phe
>WENV170135646
CENU01266554
242540
Alphaproteobacteria
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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