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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170153369
CEOF01085559
165250
Alphaproteobacteria
TGG
Pro
>WENV170153595
CEOF01111324
149985
Alphaproteobacteria
ACG
Arg
>WENV170154943
CEOF01359676
237740
Alphaproteobacteria
TTT
Lys
>WENV170154008
CEOF01160548
252148
Alphaproteobacteria
TGT
Thr
>WENV170153741
CEOF01129146
167926
Alphaproteobacteria
CAT
Met
>WENV170153791
CEOF01133964
241518
Alphaproteobacteria
CCA
Trp
>WENV170153691
CEOF01121900
160158
Alphaproteobacteria
GAT
Ile
>WENV170153969
CEOF01156582
266073
Alphaproteobacteria
TTT
Lys
>WENV170154342
CEOF01194544
351007
Alphaproteobacteria
TTC
Glu
>WENV170153845
CEOF01141091
351007
Alphaproteobacteria
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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