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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170153614
CEOF01113777
165001
Bacteroidota
GTT
Asn
>WENV170153782
CEOF01132322
165001
Bacteroidota
GTT
Asn
>WENV170154101
CEOF01171051
165001
Bacteroidota
GTT
Asn
>WENV170154287
CEOF01190132
165001
Bacteroidota
GTT
Asn
>WENV170153829
CEOF01138239
99288
Bacteroidota
TAG
Leu
>WENV170154672
CEOF01213143
338625
Bacteroidota
TTC
Glu
>WENV170153151
CEOF01060833
127458
Bacteroidota
GAC
Val
>WENV170153447
CEOF01094147
127458
Bacteroidota
GAC
Val
>WENV170154095
CEOF01170550
127458
Bacteroidota
GAC
Val
>WENV170152939
CEOF01042361
270933
Bacteroidota
CAT
Met
>WENV170153307
CEOF01078740
270933
Bacteroidota
CAT
Met
>WENV170153455
CEOF01095178
270933
Bacteroidota
CAT
Met
>WENV170154012
CEOF01160931
270933
Bacteroidota
CAT
Met
>WENV170152948
CEOF01043326
414401
Bacteroidota
GCA
Cys
>WENV170154046
CEOF01164631
151405
Bacteroidota
TGC
Ala
>WENV170154322
CEOF01192780
96678
Bacteroidota
TAG
Leu
>WENV170153502
CEOF01100466
96678
Bacteroidota
TAG
Leu
>WENV170152776
CEOF01028481
96678
Bacteroidota
TAG
Leu
>WENV170153318
CEOF01079934
273242
Bacteroidota
CCA
Trp
>WENV170153463
CEOF01096453
60695
Bacteroidota
GCT
Ser
>WENV170154622
CEOF01211498
127414
Bacteroidota
TGG
Pro
>WENV170154607
CEOF01210845
127414
Bacteroidota
TGG
Pro
>WENV170153847
CEOF01141223
127414
Bacteroidota
TGG
Pro
>WENV170154318
CEOF01192452
343033
Bacteroidota
TTC
Glu
>WENV170154700
CEOF01213729
44938
Bacteroidota
TGA
Ser
>WENV170153237
CEOF01070691
259147
Bacteroidota
TTT
Lys
>WENV170154375
CEOF01196912
17496
Bacteroidota
GGA
Ser
>WENV170152812
CEOF01032116
59930
Bacteroidota
GCT
Ser
>WENV170154303
CEOF01191108
148135
Bacteroidota
GGG
Pro
>WENV170154476
CEOF01203969
246641
Bacteroidota
GAA
Phe
>WENV170154428
CEOF01201034
246641
Bacteroidota
GAA
Phe
>WENV170154412
CEOF01199890
246641
Bacteroidota
GAA
Phe
>WENV170154373
CEOF01196640
246641
Bacteroidota
GAA
Phe
>WENV170152630
CEOF01017618
246641
Bacteroidota
GAA
Phe
>WENV170152957
CEOF01044118
165044
Bacteroidota
GTG
His
>WENV170154215
CEOF01182190
145555
Bacteroidota
GTC
Asp
>WENV170154161
CEOF01176957
145555
Bacteroidota
GTC
Asp
>WENV170153362
CEOF01084816
145555
Bacteroidota
GTC
Asp
>WENV170152895
CEOF01039288
145555
Bacteroidota
GTC
Asp
>WENV170154379
CEOF01197173
48914
Bacteroidota
TGA
Ser
>WENV170153557
CEOF01106272
48914
Bacteroidota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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