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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170166085
CEOO01033243
149985
Alphaproteobacteria
ACG
Arg
>WENV170166435
CEOO01063670
339454
Alphaproteobacteria
>WENV170166022
CEOO01027574
339722
Alphaproteobacteria
TTG
Gln
>WENV170165930
CEOO01018542
249928
Alphaproteobacteria
TAC
Val
>WENV170166039
CEOO01028980
167926
Alphaproteobacteria
CAT
Met
>WENV170166299
CEOO01049710
167926
Alphaproteobacteria
CAT
Met
>WENV170165924
CEOO01018187
161002
Alphaproteobacteria
GTG
His
>WENV170166834
CEOO01102621
254522
Alphaproteobacteria
GAA
Phe
>WENV170165777
CEOO01007065
242540
Alphaproteobacteria
TGC
Ala
>WENV170165715
CEOO01002915
160158
Alphaproteobacteria
GAT
Ile
>WENV170166366
CEOO01056110
237155
Alphaproteobacteria
>WENV170166393
CEOO01059888
342846
Alphaproteobacteria
GAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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