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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170198584
CEPL01022982
340811
Bacteroidota
GGT
Thr
>WENV170198898
CEPL01054540
139286
Bacteroidota
TGG
Pro
>WENV170198582
CEPL01022982
97610
Bacteroidota
GTA
Tyr
>WENV170199632
CEPL01133090
430187
Bacteroidota
GCA
Cys
>WENV170199060
CEPL01071291
60611
Bacteroidota
GCT
Ser
>WENV170199777
CEPL01216549
96678
Bacteroidota
TAG
Leu
>WENV170198807
CEPL01043828
273242
Bacteroidota
CCA
Trp
>WENV170199506
CEPL01124176
322068
Bacteroidota
TCC
Gly
>WENV170198606
CEPL01025387
127414
Bacteroidota
TGG
Pro
>WENV170198656
CEPL01030244
320640
Bacteroidota
TTG
Gln
>WENV170199379
CEPL01109558
17496
Bacteroidota
GGA
Ser
>WENV170199393
CEPL01111921
193627
Bacteroidota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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