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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170198957
CEPL01060594
313881
Gammaproteobacteria
GGC
Ala
>WENV170199095
CEPL01074700
313881
Gammaproteobacteria
GGC
Ala
>WENV170198614
CEPL01025984
244202
Gammaproteobacteria
TTT
Lys
>WENV170199305
CEPL01099457
290337
Gammaproteobacteria
TAC
Val
>WENV170199107
CEPL01076589
145260
Gammaproteobacteria
CAT
Met
>WENV170198716
CEPL01035378
240642
Gammaproteobacteria
GTT
Asn
>WENV170199450
CEPL01119111
426403
Gammaproteobacteria
GCA
Cys
>WENV170199108
CEPL01076589
97031
Gammaproteobacteria
TAG
Leu
>WENV170198919
CEPL01056930
199268
Gammaproteobacteria
ACG
Arg
>WENV170198372
CEPL01002984
199268
Gammaproteobacteria
ACG
Arg
>WENV170199585
CEPL01131147
411766
Gammaproteobacteria
GCA
Cys
>WENV170199302
CEPL01098829
269152
Gammaproteobacteria
GTG
His
>WENV170198433
CEPL01009760
319098
Gammaproteobacteria
TAC
Val
>WENV170199375
CEPL01108504
145713
Gammaproteobacteria
CAT
Met
>WENV170198637
CEPL01028404
319100
Gammaproteobacteria
GGT
Thr
>WENV170199139
CEPL01078821
128930
Gammaproteobacteria
GTC
Asp
>WENV170199154
CEPL01080554
237421
Gammaproteobacteria
TGT
Thr
>WENV170199655
CEPL01149083
190809
Gammaproteobacteria
GGG
Pro
>WENV170199697
CEPL01186248
73305
Gammaproteobacteria
TAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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