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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170198614
CEPL01025984
277410
Gammaproteobacteria
TTT
Lys
>WENV170199302
CEPL01098829
256881
Gammaproteobacteria
GTG
His
>WENV170198918
CEPL01056930
18367
Gammaproteobacteria
GCT
Ser
>WENV170198433
CEPL01009760
305458
Gammaproteobacteria
TAC
Val
>WENV170199107
CEPL01076589
161428
Gammaproteobacteria
CAT
Met
>WENV170198352
CEPL01000275
65736
Gammaproteobacteria
TAA
Leu
>WENV170198460
CEPL01011988
65736
Gammaproteobacteria
TAA
Leu
>WENV170199287
CEPL01096903
65736
Gammaproteobacteria
TAA
Leu
>WENV170199531
CEPL01127993
65736
Gammaproteobacteria
TAA
Leu
>WENV170199375
CEPL01108504
229608
Gammaproteobacteria
CAT
Met
>WENV170198461
CEPL01012102
451853
Gammaproteobacteria
GCA
Cys
>WENV170198834
CEPL01047230
451853
Gammaproteobacteria
GCA
Cys
>WENV170199261
CEPL01093930
451853
Gammaproteobacteria
GCA
Cys
>WENV170198722
CEPL01035979
325641
Gammaproteobacteria
CCA
Trp
>WENV170199262
CEPL01093961
325641
Gammaproteobacteria
CCA
Trp
>WENV170199450
CEPL01119111
448070
Gammaproteobacteria
GCA
Cys
>WENV170199023
CEPL01066332
263086
Gammaproteobacteria
GTT
Asn
>WENV170198619
CEPL01026129
448815
Gammaproteobacteria
TCC
Gly
>WENV170199043
CEPL01068769
307111
Gammaproteobacteria
TAC
Val
>WENV170198919
CEPL01056930
214281
Gammaproteobacteria
ACG
Arg
>WENV170199108
CEPL01076589
107919
Gammaproteobacteria
TAG
Leu
>WENV170199280
CEPL01095753
290512
Gammaproteobacteria
TGT
Thr
>WENV170199128
CEPL01077459
471753
Gammaproteobacteria
GCA
Cys
>WENV170199323
CEPL01102087
471753
Gammaproteobacteria
GCA
Cys
>WENV170199596
CEPL01131684
471753
Gammaproteobacteria
GCA
Cys
>WENV170198484
CEPL01014510
105812
Gammaproteobacteria
GTA
Tyr
>WENV170199044
CEPL01068769
236600
Gammaproteobacteria
GTC
Asp
>WENV170199306
CEPL01099457
236600
Gammaproteobacteria
GTC
Asp
>WENV170199810
CEPL01229324
449736
Gammaproteobacteria
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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