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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170211791
CEPW01108591
127458
Bacteroidota
GAC
Val
>WENV170211319
CEPW01057304
60611
Bacteroidota
GCT
Ser
>WENV170212644
CEPW01240602
151405
Bacteroidota
TGC
Ala
>WENV170212071
CEPW01142345
273242
Bacteroidota
CCA
Trp
>WENV170210773
CEPW01012439
322068
Bacteroidota
TCC
Gly
>WENV170210795
CEPW01016067
127414
Bacteroidota
TGG
Pro
>WENV170212349
CEPW01172498
320640
Bacteroidota
TTG
Gln
>WENV170211911
CEPW01121592
320640
Bacteroidota
TTG
Gln
>WENV170211601
CEPW01088807
240684
Bacteroidota
TTT
Lys
>WENV170212168
CEPW01153170
185921
Bacteroidota
GTC
Asp
>WENV170212883
CEPW01310527
110457
Bacteroidota
TAG
Leu
>WENV170211355
CEPW01060387
110457
Bacteroidota
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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