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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170220314
CEPZ01141467
147880
Bacteroidota
GGC
Ala
>WENV170220321
CEPZ01143015
147864
Bacteroidota
TGG
Pro
>WENV170220138
CEPZ01091464
416430
Bacteroidota
GCA
Cys
>WENV170219262
CEPZ01052785
81018
Bacteroidota
GTA
Tyr
>WENV170219087
CEPZ01039804
338625
Bacteroidota
TTC
Glu
>WENV170220830
CEPZ01201822
236125
Bacteroidota
GAA
Phe
>WENV170220017
CEPZ01087735
60695
Bacteroidota
GCT
Ser
>WENV170219259
CEPZ01052785
127414
Bacteroidota
TGG
Pro
>WENV170218481
CEPZ01008967
127414
Bacteroidota
TGG
Pro
>WENV170219354
CEPZ01058052
274593
Bacteroidota
TTG
Gln
>WENV170219549
CEPZ01070908
17987
Bacteroidota
GGA
Ser
>WENV170220493
CEPZ01174779
160686
Bacteroidota
CAT
Met
>WENV170219342
CEPZ01057464
159045
Bacteroidota
CAT
Met
>WENV170220341
CEPZ01146798
95727
Bacteroidota
TAG
Leu
>WENV170218610
CEPZ01015035
17496
Bacteroidota
GGA
Ser
>WENV170219261
CEPZ01052785
150454
Bacteroidota
TGT
Thr
>WENV170218748
CEPZ01021133
342872
Bacteroidota
GGT
Thr
>WENV170218595
CEPZ01013735
238609
Bacteroidota
TTT
Lys
>WENV170219347
CEPZ01057464
347866
Bacteroidota
TTC
Glu
>WENV170220940
CEPZ01206979
48382
Bacteroidota
TGA
Ser
>WENV170220124
CEPZ01088422
49675
Bacteroidota
TGA
Ser
>WENV170219630
CEPZ01073527
148047
Bacteroidota
CAT
Met
>WENV170218560
CEPZ01012439
179613
Bacteroidota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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