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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
46 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170227944
CEQF01154585
312287
Gammaproteobacteria
TGT
Thr
>WENV170227199
CEQF01055533
95633
Gammaproteobacteria
GTA
Tyr
>WENV170227528
CEQF01099807
95975
Gammaproteobacteria
GAG
Leu
>WENV170227374
CEQF01076450
147048
Gammaproteobacteria
CCA
Trp
>WENV170227909
CEQF01150724
279385
Gammaproteobacteria
TTT
Lys
>WENV170227683
CEQF01119831
235516
Gammaproteobacteria
GTG
His
>WENV170226871
CEQF01022802
283668
Gammaproteobacteria
TTT
Lys
>WENV170226724
CEQF01010367
21234
Gammaproteobacteria
TGA
Ser
>WENV170226723
CEQF01010367
21234
Gammaproteobacteria
TGA
Ser
>WENV170227200
CEQF01055552
163940
Gammaproteobacteria
CCG
Arg
>WENV170227066
CEQF01041175
153865
Gammaproteobacteria
CCG
Arg
>WENV170228069
CEQF01191973
59172
Gammaproteobacteria
CAA
Leu
>WENV170227342
CEQF01072797
240619
Gammaproteobacteria
TGT
Thr
>WENV170227534
CEQF01100693
144979
Gammaproteobacteria
CGG
Pro
>WENV170227827
CEQF01141304
237709
Gammaproteobacteria
GTG
His
>WENV170228210
CEQF01241736
195519
Gammaproteobacteria
CAT
Met
>WENV170226720
CEQF01009976
24366
Gammaproteobacteria
GGA
Ser
>WENV170227712
CEQF01124054
161409
Gammaproteobacteria
GGG
Pro
>WENV170226938
CEQF01029924
147054
Gammaproteobacteria
CAT
Met
>WENV170227967
CEQF01155724
174801
Gammaproteobacteria
TGG
Pro
>WENV170226699
CEQF01008030
144982
Gammaproteobacteria
TGG
Pro
>WENV170226788
CEQF01015231
16394
Gammaproteobacteria
TGA
Ser
>WENV170227856
CEQF01145171
23644
Gammaproteobacteria
GGA
Ser
>WENV170227344
CEQF01072797
412476
Gammaproteobacteria
TCC
Gly
>WENV170227170
CEQF01052247
237714
Gammaproteobacteria
TAC
Val
>WENV170226774
CEQF01014234
237714
Gammaproteobacteria
TAC
Val
>WENV170226760
CEQF01013355
319098
Gammaproteobacteria
TAC
Val
>WENV170226749
CEQF01011708
319098
Gammaproteobacteria
TAC
Val
>WENV170227954
CEQF01155149
147051
Gammaproteobacteria
CAT
Met
>WENV170227359
CEQF01074773
147051
Gammaproteobacteria
CAT
Met
>WENV170228017
CEQF01173518
338337
Gammaproteobacteria
CCT
Arg
>WENV170226904
CEQF01026135
411842
Gammaproteobacteria
GCA
Cys
>WENV170227429
CEQF01084281
241136
Gammaproteobacteria
TTG
Gln
>WENV170227619
CEQF01111545
250885
Gammaproteobacteria
TGC
Ala
>WENV170227561
CEQF01103659
250885
Gammaproteobacteria
TGC
Ala
>WENV170227019
CEQF01037364
128930
Gammaproteobacteria
GTC
Asp
>WENV170227508
CEQF01096659
146807
Gammaproteobacteria
TCT
Arg
>WENV170228258
CEQF01257758
59658
Gammaproteobacteria
CAA
Leu
>WENV170227169
CEQF01052247
237713
Gammaproteobacteria
TAC
Val
>WENV170227601
CEQF01109074
149037
Gammaproteobacteria
GAC
Val
>WENV170227956
CEQF01155167
411735
Gammaproteobacteria
GCA
Cys
>WENV170227378
CEQF01076995
96080
Gammaproteobacteria
CAA
Leu
>WENV170227129
CEQF01048469
175964
Gammaproteobacteria
CAT
Met
>WENV170227127
CEQF01048253
23396
Gammaproteobacteria
GGA
Ser
>WENV170226641
CEQF01002419
270352
Gammaproteobacteria
GCC
Gly
>WENV170227345
CEQF01072797
239187
Gammaproteobacteria
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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