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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170253610
CEQU01103462
256995
Actinomycetota
CGC
Ala
>WENV170254212
CEQU01255440
56987
Actinomycetota
TGA
Ser
>WENV170252449
CEQU01008468
26222
Actinomycetota
CGA
Ser
>WENV170254203
CEQU01255230
376359
Actinomycetota
CCT
Arg
>WENV170252751
CEQU01027506
259969
Actinomycetota
CTT
Lys
>WENV170253774
CEQU01123469
226114
Actinomycetota
>WENV170253287
CEQU01070475
42897
Actinomycetota
GAG
Leu
>WENV170252400
CEQU01005431
81767
Actinomycetota
>WENV170253609
CEQU01103426
88929
Actinomycetota
GTA
Tyr
>WENV170253195
CEQU01061588
305885
Actinomycetota
CCG
Arg
>WENV170252548
CEQU01014663
167859
Actinomycetota
TGT
Thr
>WENV170252989
CEQU01043406
164808
Actinomycetota
GGG
Pro
>WENV170252711
CEQU01025196
269068
Actinomycetota
GTG
His
>WENV170253695
CEQU01108839
450097
Actinomycetota
CCC
Gly
>WENV170254213
CEQU01255440
17477
Actinomycetota
GCT
Ser
>WENV170252709
CEQU01025195
475194
Actinomycetota
TCC
Gly
>WENV170252380
CEQU01002665
258145
Actinomycetota
GTT
Asn
>WENV170254211
CEQU01255352
269056
Actinomycetota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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