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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170253609
CEQU01103426
80875
Actinomycetota
GTA
Tyr
>WENV170252380
CEQU01002665
295152
Actinomycetota
GTT
Asn
>WENV170253643
CEQU01105147
338763
Actinomycetota
GCC
Gly
>WENV170252711
CEQU01025196
240825
Actinomycetota
GTG
His
>WENV170253184
CEQU01060833
411680
Actinomycetota
TCC
Gly
>WENV170252812
CEQU01030927
45128
Actinomycetota
GGA
Ser
>WENV170253291
CEQU01070476
148837
Actinomycetota
CAT
Met
>WENV170252757
CEQU01027717
95931
Actinomycetota
GTA
Tyr
>WENV170253774
CEQU01123469
153188
Actinomycetota
CAT
Met
>WENV170253681
CEQU01108108
147843
Actinomycetota
GAC
Val
>WENV170252549
CEQU01014665
374962
Actinomycetota
CCT
Arg
>WENV170252653
CEQU01022079
240687
Actinomycetota
>WENV170252810
CEQU01030927
278308
Actinomycetota
TTT
Lys
>WENV170253031
CEQU01046630
105186
Actinomycetota
TAG
Leu
>WENV170252449
CEQU01008468
24115
Actinomycetota
CGA
Ser
>WENV170252488
CEQU01010509
235231
Actinomycetota
>WENV170252548
CEQU01014663
149979
Actinomycetota
TGT
Thr
>WENV170252806
CEQU01030924
342999
Actinomycetota
GGT
Thr
>WENV170253835
CEQU01153538
338185
Actinomycetota
TGT
Thr
>WENV170252809
CEQU01030927
244227
Actinomycetota
CGT
Thr
>WENV170253529
CEQU01095838
145165
Actinomycetota
TCT
Arg
>WENV170253032
CEQU01046630
152456
Actinomycetota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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