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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
48 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170273138
CERL01052578
166654
Gammaproteobacteria
GAC
Val
>WENV170273674
CERL01115961
183605
Gammaproteobacteria
CCG
Arg
>WENV170273550
CERL01101318
235837
Gammaproteobacteria
GTT
Asn
>WENV170273118
CERL01050607
279385
Gammaproteobacteria
TTT
Lys
>WENV170273119
CERL01050607
279385
Gammaproteobacteria
TTT
Lys
>WENV170272710
CERL01009454
149035
Gammaproteobacteria
CCG
Arg
>WENV170272904
CERL01029276
149035
Gammaproteobacteria
CCG
Arg
>WENV170272822
CERL01020781
238438
Gammaproteobacteria
>WENV170273475
CERL01092558
249887
Gammaproteobacteria
GGT
Thr
>WENV170272609
CERL01001569
248041
Gammaproteobacteria
GGC
Ala
>WENV170272842
CERL01022629
236013
Gammaproteobacteria
TGC
Ala
>WENV170273111
CERL01049947
160030
Gammaproteobacteria
GGG
Pro
>WENV170274103
CERL01242829
269248
Gammaproteobacteria
CCA
Trp
>WENV170272688
CERL01007604
185163
Gammaproteobacteria
ACG
Arg
>WENV170273154
CERL01055206
240619
Gammaproteobacteria
TGT
Thr
>WENV170272726
CERL01010947
149036
Gammaproteobacteria
CCA
Trp
>WENV170273367
CERL01079276
24366
Gammaproteobacteria
GGA
Ser
>WENV170273358
CERL01078403
146791
Gammaproteobacteria
GAC
Val
>WENV170274106
CERL01243665
174801
Gammaproteobacteria
TGG
Pro
>WENV170272758
CERL01014007
149073
Gammaproteobacteria
CAT
Met
>WENV170272919
CERL01031083
412799
Gammaproteobacteria
GCA
Cys
>WENV170272634
CERL01003292
241230
Gammaproteobacteria
GAA
Phe
>WENV170272900
CERL01028838
339596
Gammaproteobacteria
CCT
Arg
>WENV170273956
CERL01204951
152450
Gammaproteobacteria
GAC
Val
>WENV170272687
CERL01007600
6972
Gammaproteobacteria
>WENV170272712
CERL01009558
8480
Gammaproteobacteria
GCT
Ser
>WENV170272714
CERL01009974
269152
Gammaproteobacteria
GTG
His
>WENV170272982
CERL01037613
237412
Gammaproteobacteria
TAC
Val
>WENV170273314
CERL01072237
147111
Gammaproteobacteria
CCG
Arg
>WENV170273156
CERL01055206
412476
Gammaproteobacteria
TCC
Gly
>WENV170273263
CERL01065574
279906
Gammaproteobacteria
TGC
Ala
>WENV170272768
CERL01014943
268812
Gammaproteobacteria
GTT
Asn
>WENV170274100
CERL01242388
241136
Gammaproteobacteria
TTG
Gln
>WENV170272961
CERL01035732
250885
Gammaproteobacteria
TGC
Ala
>WENV170272641
CERL01003847
243485
Gammaproteobacteria
TGT
Thr
>WENV170272708
CERL01009395
262546
Gammaproteobacteria
TGC
Ala
>WENV170273258
CERL01065481
411735
Gammaproteobacteria
GCA
Cys
>WENV170273038
CERL01042479
45411
Gammaproteobacteria
GGA
Ser
>WENV170273149
CERL01053916
101786
Gammaproteobacteria
GAG
Leu
>WENV170272686
CERL01007600
16460
Gammaproteobacteria
TGA
Ser
>WENV170273485
CERL01094257
175964
Gammaproteobacteria
CAT
Met
>WENV170273175
CERL01056293
147776
Gammaproteobacteria
ACG
Arg
>WENV170273174
CERL01056293
147776
Gammaproteobacteria
ACG
Arg
>WENV170273173
CERL01056293
147776
Gammaproteobacteria
ACG
Arg
>WENV170273820
CERL01162357
147049
Gammaproteobacteria
GGG
Pro
>WENV170273472
CERL01092558
150183
Gammaproteobacteria
CCG
Arg
>WENV170273157
CERL01055206
239187
Gammaproteobacteria
GGT
Thr
>WENV170273139
CERL01052578
195986
Gammaproteobacteria
GAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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