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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170309961
CESM01003321
236214
Actinomycetota
CCA
Trp
>WENV170310007
CESM01006621
240687
Actinomycetota
>WENV170310970
CESM01089622
240687
Actinomycetota
>WENV170311036
CESM01096226
162173
Actinomycetota
TGG
Pro
>WENV170311077
CESM01102543
236214
Actinomycetota
CCA
Trp
>WENV170311169
CESM01112830
146611
Actinomycetota
CGG
Pro
>WENV170311290
CESM01126959
240960
Actinomycetota
TTC
Glu
>WENV170311379
CESM01134819
338763
Actinomycetota
GCC
Gly
>WENV170311485
CESM01147824
161445
Actinomycetota
TGG
Pro
>WENV170312026
CESM01213016
236214
Actinomycetota
CCA
Trp
>WENV170312702
CESM01391142
45767
Actinomycetota
GGA
Ser
>WENV170312997
CESM01499606
95931
Actinomycetota
GTA
Tyr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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