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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170310703
CESM01063144
165001
Bacteroidota
GTT
Asn
>WENV170311545
CESM01153278
126691
Bacteroidota
TGG
Pro
>WENV170312020
CESM01212336
353409
Bacteroidota
CCT
Arg
>WENV170310566
CESM01051753
241019
Bacteroidota
CAT
Met
>WENV170311317
CESM01129582
241019
Bacteroidota
CAT
Met
>WENV170310240
CESM01022821
127464
Bacteroidota
TAC
Val
>WENV170310453
CESM01041242
338625
Bacteroidota
TTC
Glu
>WENV170311833
CESM01191388
127458
Bacteroidota
GAC
Val
>WENV170311328
CESM01130284
127458
Bacteroidota
GAC
Val
>WENV170312530
CESM01296097
95728
Bacteroidota
GTA
Tyr
>WENV170310397
CESM01036930
60611
Bacteroidota
GCT
Ser
>WENV170312121
CESM01221395
241469
Bacteroidota
GAA
Phe
>WENV170310189
CESM01019552
96678
Bacteroidota
TAG
Leu
>WENV170309981
CESM01004966
60695
Bacteroidota
GCT
Ser
>WENV170312319
CESM01233617
127414
Bacteroidota
TGG
Pro
>WENV170312272
CESM01230552
127414
Bacteroidota
TGG
Pro
>WENV170311076
CESM01102319
127414
Bacteroidota
TGG
Pro
>WENV170310890
CESM01082300
127414
Bacteroidota
TGG
Pro
>WENV170310456
CESM01041580
238764
Bacteroidota
>WENV170311990
CESM01209679
149691
Bacteroidota
GTT
Asn
>WENV170312679
CESM01385354
343033
Bacteroidota
TTC
Glu
>WENV170312370
CESM01235422
44938
Bacteroidota
TGA
Ser
>WENV170311610
CESM01163890
17987
Bacteroidota
GGA
Ser
>WENV170310984
CESM01091003
238553
Bacteroidota
GAA
Phe
>WENV170310393
CESM01036662
150454
Bacteroidota
TGT
Thr
>WENV170312321
CESM01233704
246641
Bacteroidota
GAA
Phe
>WENV170311330
CESM01130730
246641
Bacteroidota
GAA
Phe
>WENV170311546
CESM01153278
145408
Bacteroidota
TCT
Arg
>WENV170312095
CESM01219093
165044
Bacteroidota
GTG
His
>WENV170311845
CESM01192951
165044
Bacteroidota
GTG
His
>WENV170311829
CESM01190644
145555
Bacteroidota
GTC
Asp
>WENV170311206
CESM01116526
145555
Bacteroidota
GTC
Asp
>WENV170310789
CESM01073098
145555
Bacteroidota
GTC
Asp
>WENV170310459
CESM01041750
145555
Bacteroidota
GTC
Asp
>WENV170311604
CESM01162365
412187
Bacteroidota
>WENV170312498
CESM01277516
240901
Bacteroidota
TTT
Lys
>WENV170312238
CESM01229079
240901
Bacteroidota
TTT
Lys
>WENV170310828
CESM01075686
240901
Bacteroidota
TTT
Lys
>WENV170310347
CESM01032481
240901
Bacteroidota
TTT
Lys
>WENV170312362
CESM01235141
145507
Bacteroidota
TCT
Arg
>WENV170310310
CESM01028933
240668
Bacteroidota
CAT
Met
>WENV170310640
CESM01057018
240620
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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