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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170312718
CESM01401807
149035
Gammaproteobacteria
CCG
Arg
>WENV170311086
CESM01103851
160030
Gammaproteobacteria
GGG
Pro
>WENV170311830
CESM01190725
235452
Gammaproteobacteria
GAA
Phe
>WENV170312326
CESM01234124
154268
Gammaproteobacteria
ACG
Arg
>WENV170310411
CESM01037661
149036
Gammaproteobacteria
CCA
Trp
>WENV170311363
CESM01133581
149036
Gammaproteobacteria
CCA
Trp
>WENV170311247
CESM01121167
412799
Gammaproteobacteria
GCA
Cys
>WENV170312062
CESM01216604
254914
Gammaproteobacteria
TGC
Ala
>WENV170312697
CESM01390034
411766
Gammaproteobacteria
GCA
Cys
>WENV170310587
CESM01052599
59830
Gammaproteobacteria
CAA
Leu
>WENV170310159
CESM01017035
10767
Gammaproteobacteria
GCT
Ser
>WENV170312534
CESM01297357
341782
Gammaproteobacteria
TTG
Gln
>WENV170311913
CESM01201102
237418
Gammaproteobacteria
GTT
Asn
>WENV170312581
CESM01328148
250885
Gammaproteobacteria
TGC
Ala
>WENV170311647
CESM01166984
235886
Gammaproteobacteria
TTC
Glu
>WENV170311586
CESM01159989
247088
Gammaproteobacteria
CCA
Trp
>WENV170313120
CESM01522793
149037
Gammaproteobacteria
GAC
Val
>WENV170310891
CESM01082545
157977
Gammaproteobacteria
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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